Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R1.2111911-2113745.16881.t

Possible name(s)

ACTB; ACTC1; ACTG1

Gene model

Cisavi.CG.ENS81.R1.2111911-2113745

Location

R1 [2,111,910 / 2,113,745]

Sequences

Amino acid sequence

Length: 257

>Cisavi.CG.ENS81.R1.2111911-2113745.16881.p
MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRQ
DLAGRDLTNYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDYDQELATAATSSSLEK
SYELPDGQVITIGNERFRCPEAMFQPSMLGMESTGIHETTYNSIMKCDVDIRKDLYANAV
LSGGSTMYPGIGDRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
KQEYDESGPSIVHRKCF

Nucleotide sequence

Length: 1,226

>Cisavi.CG.ENS81.R1.2111911-2113745.16881.t
GGTAGTAAAATCTGTATAAAATGCTTGACGACGACATTGCTGCTTTAGTTATTGACAATG
GGTCCGGGATGTGTAAAGCTGGATTTGCTGGCGATGATGCACCTCGGGCTGTTTTTCCAT
CACTTGTGGGAAGACCCAAACACCAGGGGGTAATGGTAGGCATGGGTCAAAAGGACAGCT
ATGTAGGTGATGAAGCACAGAGCAAACGTGGCATTTTATCACTGAAGTATCCGATAGAAC
ACGGTGTAGTAACGAACTGGGATGACATGAGAAAAGATATGGCATCATACTTTTTATAAC
GAACTTCGAGTGGCACCCGAAGAACACCCTGTTTTACTTACCGAGGCTCCGTTAAACCCA
AAGGCAAACAGAGAAAAGATGACCCAAATAATGTTTGAAACATTCAATGCCCCCGCTATG
TACGTTGCGATACAAGCAGTTCTGTCACTTTATGCATCAGGACGCACAACAGGGATTGTT
TTGGACAGCGGAGATGGTGTTTCACACACAGTGCCCATTTATGAAGGTTACGCTCTACCG
CACGCAATTTTGCGTCAGGACTTGGCAGGAAGAGATCTTACCAACTATTTGATGAAGATT
TTAACTGAGCGGGGTTACTCTTTTACCACAACAGCTGAACGTGAGATTGTCCGTGATATC
AAGGAAAAGTTGTGCTATGTAGCCCTGGATTACGATCAAGAACTAGCGACCGCTGCTACC
AGTAGCTCGCTTGAAAAAAGTTATGAACTACCCGACGGCCAGGTTATTACTATTGGGAAT
GAGAGATTCCGCTGTCCGGAAGCGATGTTTCAGCCTTCTATGTTAGGAATGGAATCGACT
GGAATTCATGAAACAACCTACAATTCTATCATGAAATGTGATGTGGACATTAGGAAGGAT
TTGTACGCCAACGCCGTGCTTTCTGGAGGGTCTACCATGTATCCAGGTATTGGAGATCGA
ATGCAGAAAGAAATTACTTCACTTGCCCCAAGCACAATGAAAATCAAGATAATTGCTCCT
CCGGAAAGGAAATACTCCGTGTGGATCGGAGGATCAATTCTTGCTTCGCTATCCACTTTC
CAGCAGATGTGGATCAGCAAACAAGAATATGACGAGTCCGGTCCTTCAATTGTACATAGA
AAGTGCTTTTAAGCCATCTTACGGCAAGGAGTGTTCCTTAATTTCTGTGGTGGTCAGTTC
AGTTCACAGCGTGTTCTTCGTTCGGT

InterProScan

SMART	Actin (IPR004000) - T[1-257] 3.1E-109
Pfam	Actin (IPR004000) - T[1-257] 3.3E-101
PANTHER	Actin (IPR004000) - T[1-256] 2.7E-177
PRINTS	Actin (IPR004000) - T[22-41] 6.6E-21 - T[118-134] 6.6E-21
ProSitePatterns	Actin_CS (IPR004001) - T[238-246] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ACTG_HUMAN	93.385 %	506	0
ACTB_HUMAN	93.385 %	506	0
ACTC_HUMAN	91.051 %	498	1.8E-179