- Transcript 'Boleac.CG.SB_v3.S39....' >
- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- EST 'AHC0AAA224YI17_RM1' >
- Transcript 'Cisavi.CG.ENS81.R117...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R117.426843-433417.11443.t
Possible name(s)
BTBD9; SPOP; SPOPL
Gene model
Location
R117 [427,082 / 433,405]
Amino acid sequence
Length: 401
>Cisavi.CG.ENS81.R117.426843-433417.11443.p
SSRSGSPSPSNDMLGTPVAENWCYTQVKVVKFSYMWTINNFSFCREEMGEVLRSSTFSSG
ANDKMKWCLRVNPKGLDEESKDYLSLYLLLVSCHKSEVRAKFKFSILNSKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLMDESNGLLPDDKLTLFCEVSVVQDSVNISGQSNMMQLK
VPECRLSKDFESLLDESHFTDCIFAVEGKEYKAHKAYSRSPVFRAMFEHEMEESKLNRVE
ISDIPHPVFKEMLSFLYTGQASKLDVMASQLLAAADKVILFRKISVLEKKYESFIKLSVN
KHCIKRYALERLKVMCEESLCSNLSVENVAETLILADLHNACQLKEMAIDFINNHALDVM
ETGGFNIMVRSHPHLVADAFRALAAIQSPPSGPPRKRLKSS
Nucleotide sequence
Length: 1,540
>Cisavi.CG.ENS81.R117.426843-433417.11443.t
TCATCAAGGTCTGGTAGCCCATCTCCTTCAAATGACATGTTAGGAACCCCTGTTGCTGAA
AATTGGTGTTATACCCAGGTAAAAGTTGTGAAGTTCTCGTATATGTGGACGATAAACAAC
TTCAGTTTTTGCCGCGAAGAAATGGGGGAGGTGTTGCGCAGTTCCACATTTTCATCCGGT
GCAAATGATAAAATGAAATGGTGTTTAAGGGTAAACCCTAAAGGTTTGGATGAGGAATCC
AAAGATTATCTGTCGTTATATCTTTTACTTGTGTCCTGTCATAAAAGTGAAGTCCGGGCT
AAGTTTAAATTCTCAATTCTCAACAGTAAACGGGAAGAAACAAAAGCAATGGAAAGTCAA
CGAGCATATAGATTTGTTCAAGGAAAAGATTGGGGTTTTAAGAAGTTTATTCGAAGGGAT
TTTTTAATGGATGAATCAAATGGTTTGCTGCCTGATGACAAGTTAACGCTGTTTTGTGAG
GTCAGTGTCGTGCAAGATTCTGTAAATATATCCGGTCAATCGAACATGATGCAACTAAAA
GTTCCAGAGTGTCGCTTATCAAAAGACTTCGAAAGCTTACTAGATGAATCACATTTTACA
GATTGCATTTTTGCCGTAGAAGGCAAAGAATATAAAGCTCACAAAGCCTATTCTCGGTCA
CCCGTCTTCCGTGCCATGTTCGAACATGAGATGGAGGAAAGCAAGTTAAATCGAGTTGAA
ATATCCGATATTCCTCATCCAGTCTTCAAGGAAATGCTCAGTTTTCTGTACACTGGCCAG
GCTTCAAAATTGGACGTTATGGCTTCACAATTATTAGCAGCGGCTGACAAGGTGATTTTA
TTTAGGAAAATTAGTGTCCTAGAAAAAAAATATGAGTCATTTATAAAGTTGTCTGTCAAC
AAACATTGCATAAAAAGGTATGCTTTGGAAAGATTAAAAGTAATGTGCGAAGAGTCACTT
TGTTCCAACCTGTCTGTTGAAAATGTTGCTGAAACTCTGATTTTAGCGGATTTGCATAAT
GCTTGTCAGCTCAAAGAAATGGCAATTGATTTTATTAACAATCATGCGCTTGATGTGATG
GAAACAGGAGGTTTCAACATCATGGTGCGCTCTCATCCCCACCTAGTGGCCGACGCGTTC
CGTGCCCTCGCAGCGATCCAGTCCCCTCCGTCAGGTCCCCCGCGGAAGCGTCTCAAATCA
TCAAATTCGTGAGAGGATGTTACTGGGTGTGGTTATGCGTCGTGAAAAGCTCATTTATAG
CGGATTGGTTGAAGGGCCACTTCAGAGGAGATTTGCATTATTAAAACCGGTTGCCGTCTA
TACCAGTTTGTGTTAATGATTTTTACTTTAAAAGTCTTTCACTCTTGATCTGCTATTAAT
AACAAATTATTTTCCACTTAAAACAGAATTTTTTCTATAAATAAATCTCTTGTCACAAAC
ATTAAAATTAGATTTTGCCCCGTTTTGTTAGTATGAATAAATGTGATTTCTTTCTTGTAA
AAGTAACACTAGATAAACTGTAATGCAGTTTAATCGAGTA
| SUPERFAMILY |
TRAF-like (IPR008974) - T[29-170] 4.25E-46 |
| Gene3D |
TRAF-like (IPR008974) - T[29-166] 2.1E-43 |
| ProSiteProfiles |
MATH/TRAF_dom (IPR002083) - T[31-161] 28.42 |
| SMART |
MATH/TRAF_dom (IPR002083) - T[36-142] 8.2E-15 |
| Pfam |
MATH/TRAF_dom (IPR002083) - T[65-161] 1.3E-6 |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[177-262] 2.88E-22 - T[324-354] 2.88E-22 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[190-277] 1.4E-19 |
| SMART |
BTB/POZ_dom (IPR000210) - T[200-295] 1.8E-14 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[200-265] 13.364 |
| CDD |
SPOP_C (IPR034089) - T[324-385] 3.63258E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPOP_HUMAN | 71.144 % | 553 | 0 |
| SPOPL_HUMAN | 68.333 % | 546 | 0 |