- Transcript 'Cisavi.CG.ENS81.R117...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R117.426843-433417.11441.t
Possible name(s)
BTBD9; SPOP; SPOPL
Gene model
Location
R117 [426,842 / 433,405]
Amino acid sequence
Length: 394
>Cisavi.CG.ENS81.R117.426843-433417.11441.p
SSRSGSPSPSNDMLGTPVAENWCYTQVKVVKFSYMWTINNFSFCREEMGEVLRSSTFSSG
ANDKMKWCLRVNPKGLDEESKDYLSLYLLLVSCHKSEVRAKFKFSILNSKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLMDESNGLLPDDKLTLFCEVSVVQDSVNISGQSNMMQLK
VPECRLSKDFESLLDESHFTDCIFAVEGKEYKAHKAYSRSPVFRAMFEHEMEESKLNRVE
ISDIPHPVFKEMLSFLYTGQASKLDVMASQLLAAADKYALERLKVMCEESLCSNLSVENV
AETLILADLHNACQLKEMAIDFINKSNEIKNNSNKKTKWCKDGFYNCHALDVMETGGFNI
MVRSHPHLVADAFRALAAIQSPPSGPPRKRLKSS
Nucleotide sequence
Length: 1,759
>Cisavi.CG.ENS81.R117.426843-433417.11441.t
TCATCAAGGTCTGGTAGCCCATCTCCTTCAAATGACATGTTAGGAACCCCTGTTGCTGAA
AATTGGTGTTATACCCAGGTAAAAGTTGTGAAGTTCTCGTATATGTGGACGATAAACAAC
TTCAGTTTTTGCCGCGAAGAAATGGGGGAGGTGTTGCGCAGTTCCACATTTTCATCCGGT
GCAAATGATAAAATGAAATGGTGTTTAAGGGTAAACCCTAAAGGTTTGGATGAGGAATCC
AAAGATTATCTGTCGTTATATCTTTTACTTGTGTCCTGTCATAAAAGTGAAGTCCGGGCT
AAGTTTAAATTCTCAATTCTCAACAGTAAACGGGAAGAAACAAAAGCAATGGAAAGTCAA
CGAGCATATAGATTTGTTCAAGGAAAAGATTGGGGTTTTAAGAAGTTTATTCGAAGGGAT
TTTTTAATGGATGAATCAAATGGTTTGCTGCCTGATGACAAGTTAACGCTGTTTTGTGAG
GTCAGTGTCGTGCAAGATTCTGTAAATATATCCGGTCAATCGAACATGATGCAACTAAAA
GTTCCAGAGTGTCGCTTATCAAAAGACTTCGAAAGCTTACTAGATGAATCACATTTTACA
GATTGCATTTTTGCCGTAGAAGGCAAAGAATATAAAGCTCACAAAGCCTATTCTCGGTCA
CCCGTCTTCCGTGCCATGTTCGAACATGAGATGGAGGAAAGCAAGTTAAATCGAGTTGAA
ATATCCGATATTCCTCATCCAGTCTTCAAGGAAATGCTCAGTTTTCTGTACACTGGCCAG
GCTTCAAAATTGGACGTTATGGCTTCACAATTATTAGCAGCGGCTGACAAGTATGCTTTG
GAAAGATTAAAAGTAATGTGCGAAGAGTCACTTTGTTCCAACCTGTCTGTTGAAAATGTT
GCTGAAACTCTGATTTTAGCGGATTTGCATAATGCTTGTCAGCTCAAAGAAATGGCAATT
GATTTTATTAACAAGAGTAATGAAATTAAAAACAATAGTAACAAAAAAACGAAATGGTGT
AAGGATGGTTTTTATAATTGTCATGCGCTTGATGTGATGGAAACAGGAGGTTTCAACATC
ATGGTGCGCTCTCATCCCCACCTAGTGGCCGACGCGTTCCGTGCCCTCGCAGCGATCCAG
TCCCCTCCGTCAGGTCCCCCGCGGAAGCGTCTCAAATCATCAAATTCGTGAGAGGATGTT
ACTGGGTGTGGTTATGCGTCGTGAAAAGCTCATTTATAGCGGATTGGTTGAAGGGCCACT
TCAGAGGAGATTTGCATTATTAAAACCGGTTGCCGTCTATACCAGTTTGTGTTAATGATT
TTTACTTTAAAAGTCTTTCACTCTTGATCTGCTATTAATAACAAATTATTTTCCACTTAA
AACAGAATTTTTTCTATAAATAAATCTCTTGTCACAAACATTAAAATTAGATTTTGCCCC
GTTTTGTTAGTATGAATAAATGTGATTTCTTTCTTGTAAAAGTAACACTAGATAAACTGT
AATGCAGTTTAATCGAGTATTAGTGTACATCGCCTTTTTCAATGATTATATTTTATACTG
TGAATTGATCAGAATTTCCCACGCTTTTTGTATGACTCTGTTCCACAATGTGAATGAAAA
AATGGTTTTGAAAAAGACGTTTTCGCATATCTTGGCGTTCTTTTTTGTGCGTAATACTTC
GCCTGTCTTGTTTAACCAACTCGCGAATTAATTAATATGATTACACCTAACTTGCATTAA
ATACCACGATATTAAAATA
| Gene3D |
TRAF-like (IPR008974) - T[29-165] 2.0E-43 |
| SUPERFAMILY |
TRAF-like (IPR008974) - T[29-170] 4.09E-46 |
| ProSiteProfiles |
MATH/TRAF_dom (IPR002083) - T[31-161] 28.42 |
| SMART |
MATH/TRAF_dom (IPR002083) - T[36-142] 8.2E-15 |
| Pfam |
MATH/TRAF_dom (IPR002083) - T[65-161] 1.2E-6 |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[177-293] 1.35E-27 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[190-294] 1.3E-25 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[200-265] 13.364 |
| SMART |
BTB/POZ_dom (IPR000210) - T[200-295] 9.7E-23 |
| CDD |
SPOP_C (IPR034089) - T[295-378] 6.82706E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPOP_HUMAN | 72.405 % | 553 | 0 |
| SPOPL_HUMAN | 73.048 % | 564 | 0 |