- Transcript 'KH2012:KH.C5.548.v1....' >
- Clone 'csef004c19' >
- Transcript 'Cisavi.CG.ENS81.R116...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R116.292090-299456.05359.t
Possible name(s)
AP1B1; COPG1; COPG2
Gene model
Location
R116 [292,101 / 299,341]
Amino acid sequence
Length: 679
>Cisavi.CG.ENS81.R116.292090-299456.05359.p
VSSAALVSSLHLTKQAFDVVKRWVNEVQESCSNDSIMVQYHALGLLYHLRKKDRLATSKM
VTKFMKSGMKSPFAYCMLIRIASKLLEEDDSGVAMKHPSAVTACNLDLENLITDVNRSIA
TLAITTLLKTGSESSVDRLMKQISSFMSEISDEFKVVVVRAISALCQKYPRQHSVMMSYL
ASMLRAEGGFEYKKAIVECIISILEDSAESKESGLAHLCEFIEKARVLFSRYWDPLIKQL
VAMAVLFLLLATKIIHLLGREGPKTPNPSKYIRFIYNRVILENEAVRAAAVSALARFGAQ
CDDLRESILSLLSRSMMDEDDEVRDRATFYFHTLQQQQKALNSAYILNGWFKSVSVPALE
RCLQQYFPPNPPCISVLTSRKAKEQPTASKQEIYAGNPPVVCHIRMVVNPIPPTSPHFTS
SPPPEQLSRIPEFGVLGNLFKSSDAVELTESETEYVVKCTKHTFPHHLVLQFDCTNTLND
QVLEDVTVQVEQSDAFEVIAYVPCPSLPYNQPGVAYACVAIPEGDEVTTTLSCVMKFRVK
DCDPNTGEADDDGYDDEYVLEDLDIVVADHVQKVIKSNFGSSWDELGDGNELEDTYALSS
LNTLQDAVRDIIKYLGMQACERSDKVPDGKSSHSLFLAGVYRGGHDVLARAKLVLKDGVT
MQLTVRSSDAEAARVVTSA
Nucleotide sequence
Length: 2,037
>Cisavi.CG.ENS81.R116.292090-299456.05359.t
GTGTCTAGCGCCGCCCTAGTGTCATCCCTGCACCTGACGAAGCAAGCGTTTGACGTGGTG
AAACGCTGGGTGAACGAGGTCCAGGAATCTTGTTCCAACGACAGCATCATGGTGCAGTAC
CACGCGCTGGGCCTTCTGTACCACCTGCGCAAGAAGGACCGCTTGGCCACTTCGAAGATG
GTAACCAAGTTCATGAAATCCGGAATGAAATCTCCATTCGCATATTGCATGCTCATTCGC
ATCGCCAGCAAACTGCTGGAGGAAGATGACTCAGGTGTGGCAATGAAACACCCATCGGCG
GTGACAGCGTGCAACTTAGACTTGGAAAACCTGATCACTGATGTCAACCGGAGTATCGCT
ACCCTGGCTATCACTACATTGCTCAAGACGGGAAGTGAGAGCAGTGTTGATCGCCTGATG
AAACAAATATCGTCGTTCATGTCGGAGATATCAGACGAGTTCAAAGTGGTCGTTGTACGA
GCCATATCAGCGCTGTGCCAGAAGTATCCACGGCAACACTCAGTTATGATGTCATATTTG
GCATCTATGTTACGAGCCGAGGGAGGGTTCGAATACAAGAAAGCGATCGTCGAATGCATC
ATCTCCATCCTGGAGGATTCAGCAGAGTCCAAGGAGAGCGGTCTCGCTCATCTTTGTGAG
TTTATTGAGAAGGCGAGGGTGTTGTTCTCACGCTACTGGGACCCCTTAATTAAGCAATTG
GTTGCTATGGCTGTGTTGTTTCTTTTGCTCGCCACCAAGATAATCCACCTGTTGGGAAGG
GAAGGACCCAAGACACCCAACCCATCGAAATATATCCGCTTCATATACAACCGAGTTATA
CTGGAGAATGAAGCAGTACGCGCTGCCGCGGTATCAGCCCTGGCACGGTTCGGAGCGCAG
TGCGACGATCTCCGCGAAAGCATCCTCTCCCTCCTCTCCCGCTCCATGATGGATGAGGAT
GACGAAGTGAGAGACCGAGCCACCTTCTACTTCCACACTCTGCAACAACAGCAGAAGGCG
CTCAACTCAGCGTACATACTCAACGGTTGGTTCAAGTCGGTATCGGTCCCTGCATTGGAG
CGATGTCTGCAACAATACTTTCCCCCCAACCCACCTTGCATTTCAGTTCTCACCTCCCGG
AAGGCAAAGGAGCAACCAACCGCCTCGAAGCAGGAGATTTACGCAGGTAACCCCCCCGTT
GTGTGTCACATAAGGATGGTCGTTAACCCCATTCCCCCCACATCACCCCATTTCACCTCT
TCCCCCCCACCAGAGCAACTATCAAGGATCCCGGAGTTCGGGGTGTTGGGCAACCTCTTC
AAATCGTCGGACGCAGTGGAGTTGACGGAATCGGAGACGGAATACGTGGTCAAATGCACC
AAACACACCTTCCCACATCACCTTGTGTTGCAGTTCGATTGCACGAACACGCTGAACGAC
CAAGTATTGGAGGACGTGACGGTGCAAGTGGAACAGAGCGATGCATTCGAGGTGATCGCG
TACGTGCCGTGCCCCTCTCTCCCGTACAACCAGCCCGGCGTGGCGTATGCGTGCGTGGCG
ATCCCCGAGGGTGATGAGGTCACGACCACTCTCTCATGCGTCATGAAGTTCAGAGTGAAG
GATTGCGATCCGAACACTGGGGAGGCAGATGATGATGGCTACGATGATGAGTATGTGCTT
GAGGACTTGGACATCGTAGTAGCGGACCACGTACAGAAAGTCATCAAATCGAACTTCGGT
TCTTCATGGGATGAGTTGGGAGATGGGAATGAACTCGAGGACACATACGCGCTGTCGAGC
TTGAACACATTGCAAGACGCTGTGCGTGACATCATCAAGTACCTGGGTATGCAAGCATGT
GAGAGGTCGGACAAAGTACCGGATGGGAAGTCCTCGCACTCATTGTTCCTTGCTGGGGTG
TATAGAGGGGGGCATGACGTGTTAGCACGCGCTAAACTCGTGCTCAAAGATGGCGTCACA
ATGCAACTCACTGTGCGGAGTTCCGACGCTGAAGCCGCTAGAGTCGTCACTTCCGCT
| PANTHER |
Coatomer_gsu (IPR017106) - T[1-92] 5.2E-288 - T[93-676] 5.2E-288 |
| PIRSF |
Coatomer_gsu (IPR017106) - T[1-92] 8.9E-36 - T[91-679] 4.3E-187 |
| Pfam |
Clathrin/coatomer_adapt-like_N (IPR002553) - T[1-90] 1.3E-12 - T[93-337] 1.8E-49 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[2-341] 2.01E-39 |
| Gene3D |
ARM-like (IPR011989) - T[91-348] 1.3E-33 |
| SUPERFAMILY |
Clathrin_app_Ig-like_sf (IPR013041) - T[419-569] 1.26E-54 |
| Gene3D |
Coatomer_gsu_app_sf (IPR037067) - T[419-566] 5.5E-61 |
| Pfam |
Coatomer_gsu_app_Ig-like_dom (IPR013040) - T[425-565] 3.1E-57 |
| Gene3D |
TBP_dom_sf (IPR012295) - T[567-679] 5.1E-44 |
| Pfam |
Coatomer_g_Cpla (IPR032154) - T[568-679] 5.0E-38 |
| SUPERFAMILY |
Coatomer/calthrin_app_sub_C (IPR009028) - T[570-678] 3.34E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COPG2_HUMAN | 57.357 % | 724 | 0 |
| COPG1_HUMAN | 58.615 % | 726 | 0 |