Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 764

>Cisavi.CG.ENS81.R116.292090-299456.05357.p
SVSSAALVSSLHLTKQAFDVVKRWVNEVQESCSNDSIMVQVSISTNLPCAPHMVPYHALG
LLYHLRKKDRLATSKMVTKFMKSGMKSPFAYCMLIRIASKLLEEDDSGRDSPLFNFIESC
LRNKHELVIYEAASAIVNMPNCSARELAPAVSVLQQFISSAQPSMRFAGVKTLSKVAMKH
PSAVTACNLDLENLITDVNRSIATLAITTLLKTGSESSVDRLMKQISSFMSEISDEFKVV
VVRAISALCQKYPRQHSVMMSYLASMLRAEGGFEYKKAIVECIISILEDSAESKESGLAH
LCEFIEEEFILEGEVLATKIIHLLGREGPKTPNPSKYIRFIYNRVILENEAVRAAAVSAL
ARFGAQCDDLRESILSLLSRSMMDEDDEVRDRATFYFHTLQQQQKALNSAYILNGLAVSV
PALERCLQQYLLEPSDEKFNLKSVPLMAIPDSEPKLDSVLTSRKAKEQPTASKQEIYAGN
PPVVCHIRMVVNPIPPTSPHFTSSPPPEQLSRIPEFGVLGNLFKSSDAVELTESETEYVV
KCTKHTFPHHLVLQFDCTNTLNDQVLEDVTVQVEQSDAFEVIAYVPCPSLPYNQPGVAYA
CVAIPEGDEVTTTLSCVMKFRVKDCDPNTGEADDDGYDDEYVLEDLDIVVADHVQKVIKS
NFGSSWDELGDGNELEDTYALSSLNTLQDAVRDIIKYLGMQACERSDKVPDGKSSHSLFL
AGVYRGGHDVLARAKLVLKDGVTMQLTVRSSDAEAARVVTSAVA

Nucleotide sequence

Length: 2,295

>Cisavi.CG.ENS81.R116.292090-299456.05357.t
TCTGTGTCTAGCGCCGCCCTAGTGTCATCCCTGCACCTGACGAAGCAAGCGTTTGACGTG
GTGAAACGCTGGGTGAACGAGGTCCAGGAATCTTGTTCCAACGACAGCATCATGGTGCAG
GTGAGCATTAGTACCAACCTTCCCTGTGCACCCCATATGGTCCCTTACCACGCGCTGGGC
CTTCTGTACCACCTGCGCAAGAAGGACCGCTTGGCCACTTCGAAGATGGTAACCAAGTTC
ATGAAATCCGGAATGAAATCTCCATTCGCATATTGCATGCTCATTCGCATCGCCAGCAAA
CTGCTGGAGGAAGATGACTCAGGTCGCGACAGCCCTCTCTTTAACTTCATTGAGAGTTGT
CTGAGGAACAAACACGAGTTGGTGATTTATGAAGCAGCGTCTGCCATCGTGAATATGCCC
AACTGCTCAGCACGGGAACTCGCTCCAGCTGTTTCTGTCCTCCAGCAGTTTATATCATCT
GCTCAACCTTCAATGAGGTTTGCTGGGGTCAAGACCTTGAGCAAGGTGGCAATGAAACAC
CCATCGGCGGTGACAGCGTGCAACTTAGACTTGGAAAACCTGATCACTGATGTCAACCGG
AGTATCGCTACCCTGGCTATCACTACATTGCTCAAGACGGGAAGTGAGAGCAGTGTTGAT
CGCCTGATGAAACAAATATCGTCGTTCATGTCGGAGATATCAGACGAGTTCAAAGTGGTC
GTTGTACGAGCCATATCAGCGCTGTGCCAGAAGTATCCACGGCAACACTCAGTTATGATG
TCATATTTGGCATCTATGTTACGAGCCGAGGGAGGGTTCGAATACAAGAAAGCGATCGTC
GAATGCATCATCTCCATCCTGGAGGATTCAGCAGAGTCCAAGGAGAGCGGTCTCGCTCAT
CTTTGTGAGTTTATTGAGGAAGAATTTATTTTAGAAGGCGAGGTGCTCGCCACCAAGATA
ATCCACCTGTTGGGAAGGGAAGGACCCAAGACACCCAACCCATCGAAATATATCCGCTTC
ATATACAACCGAGTTATACTGGAGAATGAAGCAGTACGCGCTGCCGCGGTATCAGCCCTG
GCACGGTTCGGAGCGCAGTGCGACGATCTCCGCGAAAGCATCCTCTCCCTCCTCTCCCGC
TCCATGATGGATGAGGATGACGAAGTGAGAGACCGAGCCACCTTCTACTTCCACACTCTG
CAACAACAGCAGAAGGCGCTCAACTCAGCGTACATACTCAACGGACTAGCGGTATCGGTC
CCTGCATTGGAGCGATGTCTGCAACAATACTTGTTGGAACCGAGCGATGAGAAGTTCAAC
TTGAAGTCGGTTCCTCTCATGGCCATCCCTGATTCCGAACCCAAGCTCGATTCAGTTCTC
ACCTCCCGGAAGGCAAAGGAGCAACCAACCGCCTCGAAGCAGGAGATTTACGCAGGTAAC
CCCCCCGTTGTGTGTCACATAAGGATGGTCGTTAACCCCATTCCCCCCACATCACCCCAT
TTCACCTCTTCCCCCCCACCAGAGCAACTATCAAGGATCCCGGAGTTCGGGGTGTTGGGC
AACCTCTTCAAATCGTCGGACGCAGTGGAGTTGACGGAATCGGAGACGGAATACGTGGTC
AAATGCACCAAACACACCTTCCCACATCACCTTGTGTTGCAGTTCGATTGCACGAACACG
CTGAACGACCAAGTATTGGAGGACGTGACGGTGCAAGTGGAACAGAGCGATGCATTCGAG
GTGATCGCGTACGTGCCGTGCCCCTCTCTCCCGTACAACCAGCCCGGCGTGGCGTATGCG
TGCGTGGCGATCCCCGAGGGTGATGAGGTCACGACCACTCTCTCATGCGTCATGAAGTTC
AGAGTGAAGGATTGCGATCCGAACACTGGGGAGGCAGATGATGATGGCTACGATGATGAG
TATGTGCTTGAGGACTTGGACATCGTAGTAGCGGACCACGTACAGAAAGTCATCAAATCG
AACTTCGGTTCTTCATGGGATGAGTTGGGAGATGGGAATGAACTCGAGGACACATACGCG
CTGTCGAGCTTGAACACATTGCAAGACGCTGTGCGTGACATCATCAAGTACCTGGGTATG
CAAGCATGTGAGAGGTCGGACAAAGTACCGGATGGGAAGTCCTCGCACTCATTGTTCCTT
GCTGGGGTGTATAGAGGGGGGCATGACGTGTTAGCACGCGCTAAACTCGTGCTCAAAGAT
GGCGTCACAATGCAACTCACTGTGCGGAGTTCCGACGCTGAAGCCGCTAGAGTCGTCACT
TCCGCTGTTGCCTAA

InterProScan

PANTHER	Coatomer_gsu (IPR017106) - T[1-479] 0.0 - T[508-763] 0.0
PIRSF	Coatomer_gsu (IPR017106) - T[1-764] 6.8E-263
Gene3D	ARM-like (IPR011989) - T[1-421] 9.3E-57
Pfam	Clathrin/coatomer_adapt-like_N (IPR002553) - T[2-403] 5.6E-85
SUPERFAMILY	ARM-type_fold (IPR016024) - T[3-408] 1.5E-53
SUPERFAMILY	Clathrin_app_Ig-like_sf (IPR013041) - T[502-652] 1.52E-54
Gene3D	Coatomer_gsu_app_sf (IPR037067) - T[502-649] 6.7E-61
Pfam	Coatomer_gsu_app_Ig-like_dom (IPR013040) - T[508-648] 3.7E-57
Gene3D	TBP_dom_sf (IPR012295) - T[650-764] 1.0E-44
Pfam	Coatomer_g_Cpla (IPR032154) - T[651-763] 2.0E-38
SUPERFAMILY	Coatomer/calthrin_app_sub_C (IPR009028) - T[653-763] 1.63E-33