Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 768

>Cisavi.CG.ENS81.R116.292090-299456.05356.p
SVSSAALVSSLHLTKQAFDVVKRWVNEVQESCSNDSIMVQVSISTNLPCASCCTCDPSDQ
YVTRYHALGLLYHLRKKDRLATSKMVTKFMKSGMKSPFAYCMLIRIASKLLEEDDSGNNL
SFPVLQQFISSAQPSMRFAGVKTLSKVYQGVCVHDVLDVYDVASAIPQLTQTFVQYAGVR
TLNKVAMKHPSAVTACNLDLENLITDVNRSIATLAITTLLKTGSESSVDRLMKQISSFMS
EISDEFKVVVVRAISALCQKYPRQHSVMMSYLASMLRAEGGFEYKKAIVECIISILEDSA
ESKESGLAHLCEFIEVRSILVLATKIIHLLGREGPKTPNPSKYIRFIYNRVILENEAVRA
AAVSALARFGAQCDDLRESILSLLSRSMMDEDDEVRDRATFYFHTLQQQQKALNSAYILN
AVSVPALERCLQQYLLEPSDEKFNLKSVPLMAIPDSEPKLDSVLTSRKAKEQPTASKQEI
YAGNPPVVCHIRMVVNPIPPTSPHFTSSPPPEQLSRIPEFGVLGNLFKSSDAVELTESET
EYVVKCTKHTFPHHLVLQFDCTNTLNDQVLEDVTVQVEQSDAFEVIAYVPCPSLPYNQPG
VAYACVAIPEGDEVTTTLSCVMKFRVKDCDPNTGEADDDGYDDEYVLEDLDIVVADHVQK
VIKSNFGSSWDELGDGNELEDTYALSSLNTLQDAVRDIIKYLGMQACERSDKVPDGKSSH
SLFLAGVYRGGHDVLARAKLVLKDGVTMQLTVRSSDAEAARVVTSAVA

Nucleotide sequence

Length: 2,307

>Cisavi.CG.ENS81.R116.292090-299456.05356.t
TCTGTGTCTAGCGCCGCCCTAGTGTCATCCCTGCACCTGACGAAGCAAGCGTTTGACGTG
GTGAAACGCTGGGTGAACGAGGTCCAGGAATCTTGTTCCAACGACAGCATCATGGTGCAG
GTGAGCATTAGTACCAACCTTCCCTGTGCGTCATGTTGCACATGTGACCCCAGTGACCAG
TATGTGACCCGATACCACGCGCTGGGCCTTCTGTACCACCTGCGCAAGAAGGACCGCTTG
GCCACTTCGAAGATGGTAACCAAGTTCATGAAATCCGGAATGAAATCTCCATTCGCATAT
TGCATGCTCATTCGCATCGCCAGCAAACTGCTGGAGGAAGATGACTCAGGGAATAATCTA
TCTTTCCCAGTCCTCCAGCAGTTTATATCATCTGCTCAACCTTCAATGAGGTTTGCTGGG
GTCAAGACCTTGAGCAAGGTTTACCAGGGCGTATGTGTGCATGATGTGCTTGATGTGTAT
GATGTTGCTTCAGCTATTCCTCAGCTCACCCAAACCTTCGTTCAATACGCAGGTGTTCGT
ACACTTAACAAGGTGGCAATGAAACACCCATCGGCGGTGACAGCGTGCAACTTAGACTTG
GAAAACCTGATCACTGATGTCAACCGGAGTATCGCTACCCTGGCTATCACTACATTGCTC
AAGACGGGAAGTGAGAGCAGTGTTGATCGCCTGATGAAACAAATATCGTCGTTCATGTCG
GAGATATCAGACGAGTTCAAAGTGGTCGTTGTACGAGCCATATCAGCGCTGTGCCAGAAG
TATCCACGGCAACACTCAGTTATGATGTCATATTTGGCATCTATGTTACGAGCCGAGGGA
GGGTTCGAATACAAGAAAGCGATCGTCGAATGCATCATCTCCATCCTGGAGGATTCAGCA
GAGTCCAAGGAGAGCGGTCTCGCTCATCTTTGTGAGTTTATTGAGGTGAGAAGCATCTTG
GTGCTCGCCACCAAGATAATCCACCTGTTGGGAAGGGAAGGACCCAAGACACCCAACCCA
TCGAAATATATCCGCTTCATATACAACCGAGTTATACTGGAGAATGAAGCAGTACGCGCT
GCCGCGGTATCAGCCCTGGCACGGTTCGGAGCGCAGTGCGACGATCTCCGCGAAAGCATC
CTCTCCCTCCTCTCCCGCTCCATGATGGATGAGGATGACGAAGTGAGAGACCGAGCCACC
TTCTACTTCCACACTCTGCAACAACAGCAGAAGGCGCTCAACTCAGCGTACATACTCAAC
GCGGTATCGGTCCCTGCATTGGAGCGATGTCTGCAACAATACTTGTTGGAACCGAGCGAT
GAGAAGTTCAACTTGAAGTCGGTTCCTCTCATGGCCATCCCTGATTCCGAACCCAAGCTC
GATTCAGTTCTCACCTCCCGGAAGGCAAAGGAGCAACCAACCGCCTCGAAGCAGGAGATT
TACGCAGGTAACCCCCCCGTTGTGTGTCACATAAGGATGGTCGTTAACCCCATTCCCCCC
ACATCACCCCATTTCACCTCTTCCCCCCCACCAGAGCAACTATCAAGGATCCCGGAGTTC
GGGGTGTTGGGCAACCTCTTCAAATCGTCGGACGCAGTGGAGTTGACGGAATCGGAGACG
GAATACGTGGTCAAATGCACCAAACACACCTTCCCACATCACCTTGTGTTGCAGTTCGAT
TGCACGAACACGCTGAACGACCAAGTATTGGAGGACGTGACGGTGCAAGTGGAACAGAGC
GATGCATTCGAGGTGATCGCGTACGTGCCGTGCCCCTCTCTCCCGTACAACCAGCCCGGC
GTGGCGTATGCGTGCGTGGCGATCCCCGAGGGTGATGAGGTCACGACCACTCTCTCATGC
GTCATGAAGTTCAGAGTGAAGGATTGCGATCCGAACACTGGGGAGGCAGATGATGATGGC
TACGATGATGAGTATGTGCTTGAGGACTTGGACATCGTAGTAGCGGACCACGTACAGAAA
GTCATCAAATCGAACTTCGGTTCTTCATGGGATGAGTTGGGAGATGGGAATGAACTCGAG
GACACATACGCGCTGTCGAGCTTGAACACATTGCAAGACGCTGTGCGTGACATCATCAAG
TACCTGGGTATGCAAGCATGTGAGAGGTCGGACAAAGTACCGGATGGGAAGTCCTCGCAC
TCATTGTTCCTTGCTGGGGTGTATAGAGGGGGGCATGACGTGTTAGCACGCGCTAAACTC
GTGCTCAAAGATGGCGTCACAATGCAACTCACTGTGCGGAGTTCCGACGCTGAAGCCGCT
AGAGTCGTCACTTCCGCTGTTGCCTAA

InterProScan

PANTHER	Coatomer_gsu (IPR017106) - T[1-41] 0.0 - T[57-483] 0.0 - T[512-767] 0.0
Gene3D	ARM-like (IPR011989) - T[1-431] 1.9E-46
PIRSF	Coatomer_gsu (IPR017106) - T[1-768] 4.5E-244
Pfam	Clathrin/coatomer_adapt-like_N (IPR002553) - T[2-409] 5.9E-70
SUPERFAMILY	ARM-type_fold (IPR016024) - T[19-418] 1.25E-49
SUPERFAMILY	Clathrin_app_Ig-like_sf (IPR013041) - T[506-656] 1.52E-54
Gene3D	Coatomer_gsu_app_sf (IPR037067) - T[506-653] 6.8E-61
Pfam	Coatomer_gsu_app_Ig-like_dom (IPR013040) - T[512-652] 3.8E-57
Gene3D	TBP_dom_sf (IPR012295) - T[654-768] 1.1E-44
Pfam	Coatomer_g_Cpla (IPR032154) - T[655-767] 2.0E-38
SUPERFAMILY	Coatomer/calthrin_app_sub_C (IPR009028) - T[657-767] 1.63E-33