Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cima879059'
  2. Clone 'cima819245'
  3. Clone 'cigd033p02'
  4. Transcript 'Cisavi.CG.ENS81.R1.1...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R1.1528700-1538766.14941.t

Possible name(s)

EHHADH; HADH; HADHA

Location

R1 [1,529,686 / 1,538,720]

Sequences

Amino acid sequence

Length: 634

>Cisavi.CG.ENS81.R1.1528700-1538766.14941.p
MNTLSKELMEEFEEVFNEIQRNKAVKGAVLISSKPGSFVAGADIDMLKNAGGEAETTELS
KNGQNLFNALEKSKKPFVAAINGVALGGGLELTLACQYRIATTDKSTNLGVPEVMLGLLP
GAGGTQRLPHLVGVASALDMALTGKMIKPKKAKKMGLVHHLVEPLVISYLLKFGAFEKNF
FNKMIKGKVMKQTNGLFPAPLLIADVIREGVINGAEAGYKAEAEGFGKLSQTNESKSLIG
LYDGQTHCKKNRFGNPAKPAKNIAVLGAGLMGAGIVQVSIDKGYNVVLKDSFSPGLARGQ
EQIYKGFNTASKKKKMTTFERDAIMAKLDATLSYDALRNADMVIEAVFEDIDIKHKVVKE
TEAVIPEHCIFASNTSALPIGDIAKASKRPEKVIGMHYFSPVDKMQLLEIITTDTTSKDT
VASAVQVGLKQGKLVIVVKDGPGFYTTRLLAPTLSEVIRMLQEGVGPQKIDKLATSFGFP
VGIATLLDEVGIDVAVHVSEYLGGVFGERFAGGNVQVLKDLVARGCAAYRFFFENRMTHN
RQHLSIRPNISVQSRSSDSDIQLRLISRFVNEAVMSLQEGILDNPLEGDIGAVFGLGFPP
HLGGPFRYVDLHGAAPLVENMRRFEAAYGAAFTP

Nucleotide sequence

Length: 2,175

>Cisavi.CG.ENS81.R1.1528700-1538766.14941.t
ATGAACACATTAAGCAAAGAACTGATGGAGGAATTTGAAGAAGTTTTCAATGAAATTCAG
CGAAACAAAGCGGTGAAAGGAGCTGTTCTTATTTCCTCCAAGCCTGGAAGTTTCGTAGCT
GGTGCTGATATAGATATGTTGAAAAACGCTGGTGGTGAAGCCGAGACGACCGAATTATCA
AAAAATGGACAAAATCTATTTAATGCACTTGAAAAGAGCAAAAAGCCTTTTGTCGCTGCA
ATTAACGGAGTTGCACTTGGTGGAGGTCTTGAGCTCACTTTGGCTTGCCAGTATAGGATT
GCTACAACTGACAAGTCAACCAATCTAGGGGTTCCTGAAGTAATGCTTGGGCTTTTACCA
GGTGCTGGTGGTACTCAGAGACTGCCACACTTGGTTGGTGTGGCATCCGCATTGGACATG
GCTCTCACTGGCAAGATGATCAAACCGAAGAAAGCCAAGAAGATGGGACTTGTTCATCAT
TTAGTAGAACCTCTTGTCATATCCTACCTCCTGAAGTTTGGTGCCTTTGAAAAAAACTTT
TTCAACAAGATGATAAAAGGAAAAGTGATGAAACAGACAAACGGATTGTTTCCAGCTCCC
CTTCTGATTGCTGACGTGATAAGAGAAGGTGTGATAAACGGTGCAGAAGCTGGTTACAAA
GCAGAGGCTGAAGGATTCGGAAAGTTGTCCCAAACTAATGAGTCAAAATCGCTCATTGGT
TTGTATGACGGTCAAACACACTGTAAGAAAAATCGATTTGGAAACCCTGCCAAACCTGCG
AAGAACATAGCTGTGCTTGGAGCTGGTCTGATGGGAGCCGGTATTGTGCAAGTCAGCATC
GATAAGGGGTACAATGTTGTGCTCAAGGATTCCTTTTCTCCCGGACTTGCCAGGGGACAG
GAGCAGATTTACAAAGGCTTCAACACCGCTTCAAAAAAAAAGAAGATGACTACTTTTGAA
CGAGATGCAATAATGGCGAAGTTGGATGCCACTCTGTCATATGATGCATTGCGCAACGCA
GACATGGTTATTGAAGCAGTATTTGAAGACATCGATATCAAGCATAAAGTTGTGAAGGAA
ACTGAAGCAGTGATTCCTGAACATTGTATTTTTGCATCAAACACATCCGCCCTACCCATC
GGTGATATTGCAAAAGCAAGCAAGAGACCTGAAAAGGTTATCGGAATGCACTATTTCTCC
CCTGTCGACAAGATGCAGTTGCTCGAGATCATTACCACGGATACCACATCGAAGGACACC
GTGGCATCTGCTGTCCAAGTTGGACTGAAGCAGGGAAAACTTGTGATCGTGGTCAAGGAT
GGACCTGGTTTCTACACAACTCGGCTTCTAGCTCCCACTCTTTCGGAAGTCATCCGGATG
TTGCAAGAAGGAGTAGGTCCTCAGAAGATCGACAAACTCGCCACATCATTCGGATTCCCA
GTGGGCATCGCCACTCTGCTGGATGAGGTTGGTATCGATGTTGCTGTGCATGTGTCCGAG
TACTTAGGTGGGGTGTTTGGTGAACGATTTGCTGGTGGCAACGTGCAAGTTCTGAAGGAC
CTCGTCGCTCGTGGATGCGCAGCTTATCGTTTTTTCTTCGAAAATCGAATGACGCACAAT
CGGCAACATCTATCGATTCGACCCAACATTTCCGTTCAATCCAGATCAAGTGACAGCGAC
ATTCAACTTCGTCTAATTTCGAGGTTTGTCAACGAAGCGGTGATGAGCTTGCAGGAAGGA
ATCCTCGACAACCCGCTTGAGGGCGACATCGGTGCTGTGTTTGGACTCGGCTTTCCACCA
CATTTGGGAGGACCATTCCGCTACGTCGATTTGCACGGCGCAGCGCCCCTAGTGGAGAAC
ATGCGCCGATTCGAGGCTGCCTATGGCGCTGCGTTCACGCCCTGCCCTTTGCTGCTTGAA
CATGCGAAAGACTCGAGCAAGAAGTTCCACTCGTCTTAATGATGTCTCCATAGTTTTTCG
CTTGTATTGTTTTGTTCGGTACCGCATATGCTATATTTGAAAATTAATTTCCAATGGTAC
CGCGCCCTGTAATGTAAAGGAAGACTGACAAATCTCGAGAATCTCCGATATTTAGCGTTT
CCACTGCTGTGTGCTGTAAAGTTCCCTTAAAGTTGGTTTCAATATTCCCCCGAAAGTTCG
ATTTCGTGTGGTGCA

InterProScan

SUPERFAMILY
ClpP/crotonase-like_dom_sf (IPR029045) - T[1-250] 1.49E-52
Pfam
Enoyl-CoA_hydra/iso (IPR001753) - T[1-162] 2.4E-38
ProSitePatterns
Enoyl-CoA_hyd/isom_CS (IPR018376) - T[78-98] .
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[260-442] 2.96E-51
Pfam
3-OHacyl-CoA_DH_NAD-bd (IPR006176) - T[262-440] 6.7E-56
SUPERFAMILY
6-PGluconate_DH-like_C_sf (IPR008927) - T[442-525] 5.19E-18 - T[557-634] 4.17E-16
Pfam
3HC_DH_C (IPR006108) - T[443-525] 3.4E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ECHP_HUMAN 29.009 % 252 2.89E-74
ECHA_HUMAN 58.309 % 776 0
HCDH_HUMAN 38.589 % 150 8.21E-41