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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S3...'
  2. Transcript 'Harore.CG.MTP2014.S2...'
  3. Transcript 'Phmamm.CG.MTP2014.S1...'
  4. Transcript 'Cisavi.CG.ENS81.R113...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R113.148927-162256.04842.t

Possible name(s)

CPNE5; CPNE8; CPNE9

Location

R113 [149,108 / 162,256]

Sequences

Amino acid sequence

Length: 640

>Cisavi.CG.ENS81.R113.148927-162256.04842.p
MAGLEFTSNFNSEQSGGWNSQPVIAIELGVSCRNLIDADLFSKSDPMVVMYTQGLGSKEW
REFGRTETIWNNLNPDFVKKFIIDYFFEERQAMRFDVYDVDSKSPDLSKHDFLGQAFCSL
GEVVGSSGSRYEAPLRTNYSACWFPAHPKIKAVVICRGTSSRNTGRIVITAEELDSSKDV
IHMQFNGRKLDKKDLFGKSDPFMVFCRCNENNSFTVCHKTEVKKNTLNPEWGMIQIPVRT
LCNGDYDRTIKVEVYDWDRDGGHDLIGIFTTSVNKLTRGPGPDNVYECINPKKKAKKKKY
KHSGLVNLLHVKIAKQFSFLDYIRGGTELNFVVAIDFTASNGNPNQPSSLHYIHPNQPNQ
YALAIQAVGDIVQDYDSDKLFPTFGFGARLPPDGRVSHEFALNFNPANPNCFGIQGVMEA
YQHSIRSVQLYGPTNFSPIINSVSRLLNMNGLSKMQHTLRAHIVSNNLIGDNPIAFKSFV
KKVNCCGSRYKVSNNHFCTCRMAVDATNGSQYYILLMITDGVISDMGATKEAIVNAARLP
ISIIIVGVGAAEFDAMEELDGDTVRVSHRGIEAERDIVQFVPFRDYIAQGKSQILSQARL
AKDVLAEIPDQLVGYMKSRRLNPGSPPPQYTSTNTASAPV

Nucleotide sequence

Length: 1,929

>Cisavi.CG.ENS81.R113.148927-162256.04842.t
GAGTAAAATATGGCTGGTTTAGAGTTTACTTCAAATTTTAACTCTGAACAAAGTGGAGGA
TGGAACAGCCAACCTGTTATAGCGATTGAATTAGGTGTGTCATGTAGGAACTTAATCGAT
GCAGATTTGTTTTCAAAGTCCGATCCAATGGTTGTCATGTACACTCAGGGTCTTGGCTCA
AAAGAATGGAGAGAGTTTGGTCGCACTGAGACAATTTGGAACAACTTGAATCCTGACTTT
GTTAAAAAGTTCATTATTGATTATTTCTTCGAGGAACGACAAGCAATGAGATTTGATGTT
TATGATGTAGATTCAAAAAGCCCAGATCTATCCAAGCACGATTTCCTGGGCCAAGCTTTT
TGTTCATTGGGCGAGGTGGTTGGCAGTTCTGGTAGTCGTTACGAGGCTCCGTTGCGCACG
AATTACAGCGCTTGCTGGTTTCCAGCCCATCCTAAAATAAAGGCGGTTGTTATCTGCAGG
GGGACATCATCACGGAACACAGGGAGGATTGTGATCACAGCCGAGGAGCTCGACTCCTCC
AAAGATGTCATCCATATGCAATTTAACGGCAGGAAACTCGATAAGAAAGATCTCTTCGGA
AAGTCCGACCCTTTTATGGTGTTCTGTCGCTGCAATGAAAACAACAGTTTTACAGTTTGC
CACAAAACCGAAGTGAAGAAGAATACTCTCAACCCGGAGTGGGGGATGATACAGATACCC
GTCCGAACACTGTGCAATGGTGACTATGATCGCACAATAAAAGTTGAAGTATACGACTGG
GACCGCGACGGAGGACACGATTTAATCGGAATCTTTACCACGTCTGTGAATAAGTTGACT
CGTGGCCCTGGTCCTGACAACGTTTACGAGTGCATTAATCCGAAAAAGAAAGCAAAGAAG
AAAAAATACAAACATTCCGGACTCGTGAACCTTCTCCACGTGAAAATCGCGAAGCAGTTC
AGCTTTCTTGATTACATTCGTGGCGGCACCGAGTTAAACTTCGTAGTCGCAATCGACTTT
ACCGCATCAAATGGCAACCCGAATCAGCCTTCTTCGTTACATTACATTCATCCTAACCAA
CCGAACCAATACGCGTTAGCTATACAGGCTGTCGGTGACATAGTTCAGGATTACGACTCG
GACAAGCTCTTTCCGACATTTGGCTTCGGCGCTCGACTGCCACCTGACGGCAGAGTATCA
CACGAGTTTGCACTGAACTTTAATCCAGCGAATCCAAACTGCTTCGGCATCCAGGGCGTA
ATGGAGGCATACCAGCACAGCATTCGCTCCGTTCAACTTTACGGGCCGACAAACTTCTCA
CCTATTATAAACAGTGTCTCCAGGTTATTAAATATGAATGGATTATCTAAGATGCAGCAT
ACACTGCGTGCGCATATAGTTTCCAACAATCTTATTGGGGATAATCCCATTGCATTTAAA
AGTTTTGTTAAAAAGGTCAATTGTTGTGGCAGTCGTTATAAAGTGAGTAACAATCACTTT
TGCACTTGCAGGATGGCGGTCGATGCAACCAACGGGTCACAATATTACATCTTGCTCATG
ATAACAGATGGTGTGATATCGGATATGGGTGCAACGAAGGAAGCGATAGTGAACGCAGCA
CGACTGCCGATCTCCATTATTATCGTGGGGGTGGGCGCCGCCGAATTTGACGCAATGGAG
GAGCTGGATGGCGACACAGTGCGCGTATCTCACCGCGGTATAGAAGCTGAAAGGGATATT
GTTCAGTTCGTACCGTTTCGCGACTACATTGCCCAAGGAAAAAGCCAAATTCTCAGTCAA
GCTCGACTTGCGAAGGACGTGCTTGCTGAAATACCAGATCAACTGGTCGGTTACATGAAG
TCTCGACGTTTGAACCCCGGGTCGCCACCTCCCCAATATACAAGCACTAACACTGCCAGC
GCCCCCGTT

InterProScan

SMART
C2_dom (IPR000008) - T[23-132] 1.9E-9 - T[163-285] 7.7E-9
Gene3D
C2_domain_sf (IPR035892) - T[29-183] 2.3E-20 - T[184-317] 2.9E-19
ProSiteProfiles
C2_dom (IPR000008) - T[30-117] 10.131 - T[186-270] 8.932
Pfam
C2_dom (IPR000008) - T[31-126] 3.6E-12 - T[186-286] 4.1E-12
CDD
C2B_Copine (IPR037768) - T[179-290] 1.61153E-54
SUPERFAMILY
vWFA_dom_sf (IPR036465) - T[329-443] 1.71E-9 - T[500-568] 1.71E-9
Pfam
Copine (IPR010734) - T[349-449] 9.8E-40 - T[506-623] 7.3E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CPNE5_HUMAN 60 % 709 0
CPNE8_HUMAN 60.201 % 711 0
CPNE9_HUMAN 56.385 % 671 0