Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Molecular Tool 'Hox5 TALEN'
  2. Transcript 'Boleac.CG.SB_v3.S27....'
  3. EST 'AHC0AAA222YJ22_RM1'
  4. Transcript 'KH2012:KH.L172.2.v1....'
  5. Transcript 'Boleac.CG.SB_v3.S25....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S25.g05971.01.t

Possible name(s)

BCO1; BCO2; RPE65

Location

S25 [258,529 / 266,254]

Sequences

Amino acid sequence

Length: 531

>Boleac.CG.SB_v3.S25.g05971.01.p
MASGVSFTKFPHLTGLEKDKTVEYRQPIKGEVTKGQIPKWIKGSFYRNGPGLIHFDEQSV
THWFDGMALPRRFEFRDDGVYYRSRFVQSQSYKKNLEAGRIVVPEFGTHVQTKQDAGFLT
RAAARMSFPEFTDNCLVNIMRIGRHIFGISETNLVREINPETLESMDRIDLAKYMPVNMM
SSSPLIDDEGTVYNFTTSLFSMGRTKYNLISIPKPDPSMTSQEALKQAKCVRGIDSSWRL
SPSYHHSFCMTAKYAIFIEQPLKMSIPKIGMAHWSNMSYSDCLEYHPELKTNFVIVDKEY
GTLVSTSYVTEPFIVYQNINAYEQDDHLVVDLCAFEQPVFFQKYLMENLKLDAEDYYKKF
NKEXNGIQTRRFVLPLNVPKKCSSDDNLVTLPLTTCTAYKKKDQVVLTPEILMTGTDYPC
INPNYIGKRYSYYYSSGGAVLPPGEKIVKIDVETKKETNIWQEKGCWASRPKFVPRPNGS
SEDDGVVMSPVWCEDGAPFLLILDGKTFEETRISFDANIPPDLHGLFVQTE

Nucleotide sequence

Length: 2,398

>Boleac.CG.SB_v3.S25.g05971.01.t
AGACACAATATATATATCAAACGAATTTCACCGGTGAAATAGCTATTATGGCAAGCGGTG
TATCTTTTACCAAATTCCCCCATCTGACTGGGTTAGAAAAAGACAAAACAGTGGAATACC
GGCAACCTATAAAAGGCGAAGTCACAAAGGGTCAAATCCCTAAGTGGATTAAAGGGTCAT
TTTACAGAAACGGCCCCGGTTTAATACACTTTGATGAACAGAGCGTGACGCATTGGTTTG
ACGGAATGGCGTTACCAAGAAGGTTCGAATTCCGCGACGATGGAGTGTATTATCGTAGTC
GTTTTGTGCAAAGTCAGAGCTACAAGAAAAATCTTGAAGCAGGGCGCATCGTGGTTCCCG
AGTTTGGTACCCACGTCCAGACGAAACAAGACGCAGGTTTCTTGACAAGAGCTGCCGCTA
GGATGTCGTTTCCAGAGTTCACTGACAACTGTCTGGTTAACATTATGCGCATTGGTCGAC
ACATTTTTGGAATCAGCGAAACCAATTTGGTTCGTGAAATCAACCCTGAAACTTTGGAAT
CCATGGATCGGATTGATTTGGCGAAGTACATGCCTGTGAATATGATGTCATCGTCTCCTC
TTATCGACGACGAGGGGACTGTGTACAACTTCACTACGTCGCTATTCAGTATGGGCAGGA
CAAAGTATAATCTGATATCAATACCAAAACCAGATCCAAGCATGACCAGTCAAGAAGCAT
TGAAGCAGGCAAAATGTGTTAGAGGTATTGATTCGTCGTGGCGCCTGAGTCCGTCCTACC
ACCACAGCTTTTGCATGACTGCGAAATACGCAATTTTCATTGAGCAACCTCTGAAAATGT
CAATTCCAAAAATCGGGATGGCACATTGGTCCAACATGAGCTACAGCGATTGCTTGGAAT
ATCATCCGGAACTGAAGACCAATTTTGTCATCGTTGACAAAGAATACGGGACTTTGGTAT
CAACATCGTATGTGACAGAACCCTTTATCGTCTACCAAAACATCAATGCTTACGAACAAG
ACGATCATCTAGTTGTAGATTTGTGTGCTTTTGAACAACCCGTGTTTTTCCAAAAATATC
TCATGGAAAATCTTAAACTTGACGCGGAAGATTATTACAAGAAATTCAACAAGGAAGNAA
ATGGAATACAGACTAGGAGATTCGTTTTGCCGCTCAATGTACCCAAGAAATGCTCATCGG
ATGACAACTTGGTCACTCTGCCGCTTACAACATGCACCGCTTATAAAAAGAAAGACCAAG
TCGTTTTGACGCCAGAAATTCTAATGACGGGAACAGATTATCCTTGCATCAATCCTAACT
ACATTGGCAAACGATACAGCTATTACTATTCGTCTGGAGGGGCTGTCCTACCGCCAGGAG
AAAAGATTGTCAAAATTGATGTGGAAACGAAGAAAGAGACTAATATCTGGCAAGAGAAGG
GCTGTTGGGCGTCTCGACCGAAGTTTGTTCCGCGCCCTAACGGATCAAGCGAAGACGATG
GGGTGGTAATGTCACCAGTTTGGTGCGAAGATGGCGCGCCTTTCCTTCTTATACTAGATG
GAAAGACTTTCGAAGAAACGAGGATCTCTTTCGACGCCAACATCCCGCCGGACCTTCACG
GATTATTCGTTCAAACCGAGTGAAGACAGTCGGTGAGCTGACAGCCCTACAGCATCTATA
GCCCAAGAAATCAAAATAACTCAATGCAGAGACTACTTTAACCGATGTTGTCTACTATAA
TTCGTATTTTAATGTTCGCTCAGCGACGCATATTCCGTTCATGTTACTATTACCGACTCA
AATCGAGTCTTCCTTTCGTGACAATATTGACACCTCCGACTAATCTNTCCAAGACAGGAA
CAACGGGCAGATGGTACGCCGAGTGTACACCGTAGTTTGAAATCATCCAGCACGCCCTTG
TTATTGCGTTGGTGAAATTGATGGCAGCTGGGGTTCGTTTCAGTTCACGAAGTAGGCCTA
TAGTCCAAGGATATACCTTTCTTTTACATCCGTAGCCGAACCTATTTTCTATTGAGATTA
ATCACATCATCGTGCTGTCCCATCAGATCTTCACTGANTATAGAAGGCGTGAAGTGCAGC
CGTCGATTNCGAGATCAACAACTTTATCATTGGCTATAATATACCATTTTGAAGGGGTTA
GGTTAATCGCATCTATACTGTTACATAGACAGTGTCTATTAGACACGTGTCAGCGGGCGA
AGAAGGCTATGGGACTACCTGTGCGAAGGTATATATATACAAGGTAAAGTATGAACATTG
ACGAGTTCGCGATTATTAGCTAACCAGAGCGATTAGATAAGATTGTGTATTTTCTGACTA
GGCGCATTGTATATATTTAAAATACGGAAAGCACCGACCAAAATAATTTCAGAGCAAC

InterProScan

PANTHER
Carotenoid_Oase (IPR004294) - T[22-529] 2.5E-129
Pfam
Carotenoid_Oase (IPR004294) - T[22-528] 4.3E-91

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
BCDO1_HUMAN 40.078 % 390 2.02E-130
BCDO2_HUMAN 34.706 % 293 1.64E-92
RPE65_HUMAN 36.812 % 303 7.62E-97