- Clone 'AHC0AAA152YJ02' >
- Clone 'cien45653' >
- Clone 'cima863984' >
- Clone 'cien64309' >
- Transcript 'Cisavi.CG.ENS81.R0.2...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.2917753-2933372.17853.t
Possible name(s)
HNRNPDL; MSI1; MSI2
Gene model
Location
R0 [2,917,752 / 2,933,372]
Amino acid sequence
Length: 310
>Cisavi.CG.ENS81.R0.2917753-2933372.17853.p
MADIPDPAMMETDTLDPGKMFVGGLSWQTSADGLKEYFSRYGEVSDAMVMRDPVTKRSRR
VVYSPYNRGFGFVTYVDPKDVDKVISNGQHVLDQKQIDPKIAVPRKAQSKMVTRTKKIFV
GGLSANTVVEDLKSYFGTYGKVEDAMLMFDKQTNRHRGFGFVTFDSEDPVEKVCEIHFHE
INNKMVECKKAQPKEVMLPTLARATAVRGRSYVDPAAYVLAAGIPGLTYARPTPATYAYP
SAYAAYPSALILSSYAHGGATPAFASYHPSPSPGARAFTAGTTSGEILTSTDPALAQHYI
GQNGSPQPGL
Nucleotide sequence
Length: 982
>Cisavi.CG.ENS81.R0.2917753-2933372.17853.t
GTTTAGGCACTTTTGTAGCTTAGTTCAAATCACACTTAAGTTTAGTTAGCATGGCCGATA
TTCCTGATCCCGCCATGATGGAAACAGACACATTGGACCCAGGAAAGATGTTTGTGGGAG
GATTGAGCTGGCAGACAAGCGCGGACGGTTTGAAGGAATATTTTAGCCGGTATGGGGAGG
TGTCGGACGCTATGGTGATGCGAGACCCTGTCACTAAGCGATCCAGGCGTGTTGTATACT
CCCCATATAACAGGGGATTTGGGTTCGTGACCTACGTTGACCCGAAAGACGTCGATAAGG
TGATCAGCAACGGACAACACGTTCTGGACCAGAAACAGATCGACCCGAAAATTGCGGTTC
CAAGAAAAGCCCAATCAAAAATGGTGACCAGGACGAAAAAGATATTTGTCGGAGGGTTGT
CCGCTAACACAGTCGTGGAAGACTTGAAATCTTACTTTGGAACATACGGAAAGGTCGAAG
ACGCAATGTTGATGTTCGACAAACAGACAAATCGTCACAGAGGCTTCGGCTTCGTAACAT
TCGACAGCGAAGACCCGGTCGAGAAAGTTTGTGAAATTCATTTCCACGAAATCAACAACA
AAATGGTTGAGTGTAAAAAAGCACAACCCAAGGAGGTGATGCTTCCCACACTGGCCAGGG
CCACAGCAGTCAGAGGGAGGTCGTATGTTGATCCTGCAGCTTACGTGCTCGCGGCCGGAA
TCCCCGGGTTAACCTACGCTCGACCAACCCCGGCTACCTACGCCTACCCATCAGCATATG
CTGCATACCCCAGTGCGTTAATTCTGAGCAGCTACGCGCACGGGGGCGCCACTCCCGCAT
TCGCCAGCTATCATCCTTCGCCGTCACCTGGCGCTAGAGCGTTCACCGCCGGCACCACCT
CTGGTGAAATTCTAACTTCAACCGACCCGGCACTTGCGCAGCACTACATCGGGCAGAATG
GCTCCCCACAGCCAGGTTTGAC
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[17-106] 2.7E-22 - T[107-197] 5.1E-23 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[18-111] 9.13E-20 - T[102-212] 7.66E-26 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[18-104] 15.494 - T[116-193] 16.62 |
| SMART |
RRM_dom (IPR000504) - T[19-100] 2.0E-17 - T[117-189] 3.8E-22 |
| Pfam |
RRM_dom (IPR000504) - T[21-94] 3.0E-10 - T[118-184] 5.2E-14 |
| CDD |
MSI_RRM2 (IPR034126) - T[117-190] 5.52381E-55 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HNRDL_HUMAN | 48.619 % | 168 | 4.49E-49 |
| MSI2H_HUMAN | 65.517 % | 299 | 4.83E-101 |
| MSI1H_HUMAN | 64.474 % | 297 | 9.56E-100 |