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- Transcript 'Cisavi.CG.ENS81.R0.2...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.2662516-2674581.17422.t
Possible name(s)
SLC6A2; SLC6A3; SLC6A4
Gene model
Location
R0 [2,664,742 / 2,673,187]
Amino acid sequence
Length: 556
>Cisavi.CG.ENS81.R0.2662516-2674581.17422.p
TESKSLLSKRNFSVASSEFSNEDAPNRERWSHKFEFLLSVIGFAVDLGNVWRFPYICFRN
GGGAFLIPYFLMIVFGGIPLFYLELVLGQYHRSGCISIWKKICPIFKGVGYAICLMAIYV
SSYYNTVIGWAVYYLYSSFAYELPWSSCNHTWADHRCLDKIAAASHNQTWSNDTQSPAQQ
FFDRHVLEVYKSSGLGDLGPPRWQIVVCLFVVYFILYFCLWKGVRSSGKVVWVTATFPYI
VLFILLVRGAMLPGASIGISYYLSPQWHLLAKPTVWLEAATQVFFSLGPGFGTLIALASY
NRFDNNCYRDAFITSVVNCLTSFMAGFVVFSVLGYMAHLHHKTDIEEVTTPGVGLLFVVY
GQALTTFNGSVFFSIIFFLMIITLGLDSSFGGLEAVITGFSDEFPETIGKHREKFVLGLL
SVSFLLALATTTEGGVYLMTLLEVYATGPAIMTVVLLESISVTWFYGIDRLCEDIKAMLG
FGPGLYWRVCWKYISPLFVSFMIVMSFIFTSNLEYGSYVFPNWSTALGWTITLSSISIVP
AYALYRYFVEAGTPKQ
Nucleotide sequence
Length: 1,668
>Cisavi.CG.ENS81.R0.2662516-2674581.17422.t
ACCGAGAGCAAAAGTCTGCTATCCAAACGGAATTTCTCAGTGGCAAGCAGTGAATTTTCA
AATGAAGACGCACCGAACCGGGAAAGATGGTCCCACAAATTTGAATTCTTACTTTCAGTG
ATTGGATTCGCCGTTGACCTGGGAAATGTTTGGCGATTTCCATACATTTGTTTCAGGAAT
GGCGGAGGTGCATTTTTGATTCCGTACTTTTTGATGATCGTATTTGGGGGAATCCCCCTT
TTCTATCTTGAACTTGTTTTGGGTCAATACCACAGAAGTGGATGTATTTCAATATGGAAA
AAGATTTGCCCGATTTTCAAAGGGGTGGGGTATGCGATCTGTCTAATGGCGATTTATGTT
TCAAGTTATTACAACACAGTCATCGGTTGGGCTGTTTATTACTTGTATAGTTCATTTGCC
TACGAATTACCATGGTCATCATGCAACCATACATGGGCAGACCACCGCTGTTTGGACAAG
ATAGCAGCAGCTTCACACAACCAAACCTGGAGCAATGACACCCAGTCTCCTGCCCAACAA
TTCTTCGACCGCCATGTTTTAGAGGTTTACAAGTCAAGTGGGTTGGGTGACCTTGGACCC
CCACGATGGCAGATAGTTGTTTGCTTATTCGTGGTCTACTTCATTCTATACTTCTGTCTC
TGGAAGGGAGTAAGATCATCTGGAAAGGTTGTGTGGGTGACTGCTACTTTCCCGTACATT
GTGTTGTTCATCCTACTGGTGCGAGGAGCCATGCTACCTGGGGCTTCTATCGGGATCAGC
TATTATCTCAGTCCTCAATGGCATCTGCTGGCAAAACCAACTGTATGGCTGGAAGCTGCA
ACTCAGGTATTTTTCTCTCTTGGACCTGGGTTTGGCACCTTAATTGCATTAGCCAGCTAC
AACAGATTCGATAACAATTGCTACAGGGATGCTTTCATCACAAGTGTGGTGAATTGCTTG
ACGAGTTTCATGGCTGGATTCGTTGTCTTCTCAGTGCTGGGCTACATGGCGCATCTTCAT
CATAAAACTGATATCGAGGAGGTTACAACCCCAGGAGTGGGATTGTTATTCGTGGTATAC
GGACAAGCTCTCACAACATTCAACGGATCCGTTTTCTTCTCCATCATTTTTTTCCTCATG
ATAATTACTCTGGGACTGGACAGCTCTTTTGGAGGTCTGGAGGCTGTGATCACTGGATTT
TCCGACGAGTTCCCAGAGACAATCGGGAAACATCGCGAGAAATTTGTCCTCGGCTTGTTG
AGCGTAAGTTTCTTGCTTGCGTTAGCGACAACCACAGAGGGAGGAGTCTATCTTATGACG
CTGCTGGAAGTTTACGCGACGGGACCTGCCATCATGACCGTTGTGTTGCTTGAATCGATC
TCAGTCACATGGTTTTATGGTATTGATCGGTTATGTGAGGACATCAAAGCAATGTTGGGT
TTTGGGCCTGGGCTTTACTGGAGGGTGTGTTGGAAGTACATCAGCCCACTTTTTGTTTCG
TTCATGATCGTGATGAGTTTCATTTTCACCTCAAATCTTGAGTACGGTTCCTATGTCTTC
CCTAATTGGTCAACAGCACTTGGATGGACGATCACTCTTTCTTCCATCTCAATAGTTCCT
GCATACGCACTCTATCGGTATTTTGTGGAGGCTGGAACCCCAAAGCAG
| PANTHER |
Na/ntran_symport (IPR000175) - T[17-555] 2.3E-234 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[26-552] 102.975 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[27-547] 2.09E-167 |
| Pfam |
Na/ntran_symport (IPR000175) - T[27-548] 2.6E-215 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[35-56] 1.1E-74 - T[64-83] 1.1E-74 - T[108-134] 1.1E-74 - T[230-247] 1.1E-74 - T[312-332] 1.1E-74 - T[367-386] 1.1E-74 - T[448-468] 1.1E-74 - T[488-508] 1.1E-74 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[51-65] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A2_HUMAN | 54.562 % | 633 | 0 |
| SC6A3_HUMAN | 50.357 % | 581 | 0 |
| SC6A4_HUMAN | 56.121 % | 647 | 0 |