- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1981258-1984468.16453.t
Possible name(s)
ZFP62; ZNF624; ZNF845
Gene model
Location
R0 [1,981,308 / 1,984,384]
Amino acid sequence
Length: 495
>Cisavi.CG.ENS81.R0.1981258-1984468.16453.p
STKLPYKCNICGETFEYVNLFSKHVLTHDSEKPFQCDECSKGFTLACSLKVHQRVHTGEK
PYRCDVCDKTFSIGSSLKDHKKIHSGKKPYKCDLCTSSFSNKNALSKHKRIHSDKKLYKC
EICDKAFNFIGNLTVHLRVHTEERPYICNYCEKAFKTAGNLTVHKRIHTGEKPYKCLVCD
KTFRQTSSLKDHSVMHTNKTPFQFKKRRLRCNDCNRCFKHPGNLKMHQKIHTQDNSFECK
VCKQSLETESSLTVHLKTHTDERPFNCLTCIKSFASSDELKSHRRSHECAPPFRCKICDK
LFSSFNAVKRHQVVHTGETNYHCHICSKAFNVECNLKTHLKIHNPVPRSKPSEVNRPKCN
ICDKTFQNEKNLKHHKRIHLKEKPYKCLLCEKSFTQAVQLRWHHDIHMNIKRHKCDICEK
TFYQKGQLKKHQRIHSGKRDYKCTVCDKSFYQSCNLRKHVVTHNEKLFKCDVCPKSFVTE
RQLKLHQTMHADRKP
Nucleotide sequence
Length: 1,485
>Cisavi.CG.ENS81.R0.1981258-1984468.16453.t
AGTACAAAACTGCCTTACAAGTGTAATATCTGCGGAGAGACGTTTGAATATGTCAACCTT
TTCTCAAAACATGTACTAACTCATGATAGTGAGAAACCGTTCCAATGTGATGAATGTTCA
AAAGGATTTACTCTCGCGTGTAGTCTAAAAGTTCATCAGCGAGTTCACACTGGCGAGAAA
CCTTATCGATGTGATGTTTGTGACAAAACGTTTTCTATTGGCAGCTCTTTAAAGGATCAT
AAAAAAATTCACAGTGGGAAGAAACCATACAAATGTGATTTGTGCACCAGTTCTTTCTCT
AACAAGAACGCTTTAAGCAAACACAAAAGAATTCATAGTGACAAAAAATTGTACAAGTGT
GAGATATGTGATAAGGCATTCAATTTTATTGGCAACTTAACTGTACATTTAAGAGTACAT
ACAGAGGAAAGGCCATACATCTGTAATTATTGTGAAAAAGCATTTAAAACTGCTGGCAAT
TTAACTGTGCATAAAAGAATTCACACTGGAGAGAAACCTTACAAATGTCTTGTATGTGAC
AAAACATTTAGGCAAACTAGTAGTTTAAAAGACCACTCTGTAATGCACACCAACAAAACC
CCTTTTCAATTTAAGAAGAGAAGACTTCGTTGTAATGATTGTAATCGATGCTTTAAACAC
CCGGGAAACTTAAAAATGCATCAGAAAATTCACACTCAAGACAATTCCTTTGAATGCAAA
GTGTGTAAGCAATCCCTTGAAACTGAAAGCAGTTTGACCGTTCATTTAAAAACACACACT
GACGAGAGGCCATTCAATTGCCTTACATGCATAAAATCGTTTGCGAGTTCTGATGAATTA
AAAAGCCATAGGAGAAGTCATGAATGCGCTCCTCCGTTCCGTTGTAAGATATGCGACAAG
TTGTTTTCCAGTTTCAACGCTGTGAAGCGTCACCAAGTAGTTCACACTGGAGAGACCAAC
TATCACTGCCACATTTGTTCGAAAGCTTTTAATGTGGAGTGCAATTTAAAAACACACTTA
AAAATTCACAATCCGGTGCCTCGCTCCAAACCTTCTGAAGTCAACAGACCGAAATGCAAC
ATATGTGACAAAACATTTCAAAATGAAAAAAATCTTAAGCATCATAAACGTATTCACCTC
AAAGAAAAACCCTACAAATGTCTTTTGTGTGAAAAATCATTCACCCAAGCAGTTCAACTG
CGCTGGCACCATGACATCCACATGAATATAAAACGTCACAAATGTGATATTTGTGAGAAA
ACCTTTTATCAAAAAGGTCAGTTAAAAAAACATCAGAGGATTCATAGTGGGAAGAGGGAC
TACAAATGTACCGTTTGCGATAAGTCGTTTTACCAATCTTGCAACTTAAGGAAGCATGTG
GTCACCCACAATGAAAAACTTTTCAAGTGTGATGTCTGCCCAAAGTCGTTCGTTACGGAA
AGGCAATTAAAATTACATCAAACGATGCACGCTGACCGGAAACCA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[5-56] 1.49E-14 - T[43-99] 1.37E-20 - T[114-175] 3.55E-20 - T[164-198] 4.27E-12 - T[209-259] 1.01E-10 - T[249-302] 4.39E-13 - T[292-343] 5.77E-14 - T[358-407] 2.63E-13 - T[393-450] 6.05E-17 - T[449-495] 1.79E-9 |
| SMART |
Znf_C2H2_type (IPR013087) - T[6-28] 0.0076 - T[34-56] 0.0074 - T[62-84] 0.0029 - T[90-112] 7.5E-4 - T[118-140] 0.0013 - T[146-168] 3.7E-4 - T[174-196] 0.0067 - T[209-231] 0.0055 - T[237-259] 0.011 - T[265-287] 0.09 - T[293-315] 0.0034 - T[321-343] 0.035 - T[357-379] 0.0039 - T[385-407] 0.038 - T[413-435] 3.3E-4 - T[441-463] 0.0021 - T[468-490] 7.3E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[6-33] 13.193 - T[34-61] 16.768 - T[62-89] 15.708 - T[90-117] 13.277 - T[118-145] 15.355 - T[146-173] 16.373 - T[174-201] 13.588 - T[209-236] 12.508 - T[237-264] 13.588 - T[265-292] 11.718 - T[293-320] 12.736 - T[321-343] 11.074 - T[357-384] 13.671 - T[385-412] 11.24 - T[413-440] 14.482 - T[441-463] 11.219 - T[468-495] 13.339 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[8-28] . - T[36-56] . - T[64-84] . - T[92-112] . - T[120-140] . - T[148-168] . - T[176-196] . - T[211-231] . - T[239-259] . - T[267-287] . - T[295-315] . - T[323-343] . - T[359-379] . - T[387-407] . - T[415-435] . - T[443-463] . - T[470-490] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN665_HUMAN | 41.513 % | 382 | 9.18E-127 |
| ZN726_HUMAN | 42.308 % | 388 | 7.65E-128 |
| ZN184_HUMAN | 40.98 % | 388 | 1.38E-127 |
