- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1981258-1984468.16452.t
Possible name(s)
ZFP62; ZNF624; ZNF845
Gene model
Location
R0 [1,981,257 / 1,984,468]
Amino acid sequence
Length: 596
>Cisavi.CG.ENS81.R0.1981258-1984468.16452.p
TKDSKLIGKLKQNNQVKSTKLPYKCNICGETFEYVNLFSKHVLTHDSEKPFQCDECSKGF
TLACSLKVHQRVHTGEKPYRCDVCDKTFSIGSSLKDHKKIHSGKKPYKCDLCTSSFSNKN
ALSKHKRIHSDKKLYKCEICDKAFNFIGNLTVHLRVHTEERPYICNYCEKAFKTAGNLTV
HKRIHTGEKPYKCLVCDKTFRQTSSLKDHSVMHTNKTPFQCHLCGKWYSRSNYLTDHLKR
HIAQKAKKIKSKRRLRCNDCNRCFKHPGNLKMHQKIHTQDNSFECKVCKQSLETESSLTV
HLKTHTDERPFNCLTCIKSFASSDELKSHRRSHECAPPFRCKICDKLFSSFNAVKRHQVV
HTGETNYHCHICSKAFNVECNLKTHLKIHNPVPRSKPSEVNRPKCNICDKTFQNEKNLKH
HKRIHLKEKPYKCLLCEKSFTQAVQLRWHHDIHMNIKRHKCDICEKTFYQKGQLKKHQRI
HSGKRDYKCTVCDKSFYQSCNLRSHLITHSKVNSYQCGICDKSFKFPVGLRKHVVTHNEK
LFKCDVCPKSFVTERQLKLHQTMHADRKPFECTVCGRSFNRVDNFRFHQKQHGHKV
Nucleotide sequence
Length: 1,791
>Cisavi.CG.ENS81.R0.1981258-1984468.16452.t
ACAAAAGATAGCAAGCTTATTGGGAAGCTGAAACAAAACAACCAAGTTAAAAGTACAAAA
CTGCCTTACAAGTGTAATATCTGCGGAGAGACGTTTGAATATGTCAACCTTTTCTCAAAA
CATGTACTAACTCATGATAGTGAGAAACCGTTCCAATGTGATGAATGTTCAAAAGGATTT
ACTCTCGCGTGTAGTCTAAAAGTTCATCAGCGAGTTCACACTGGCGAGAAACCTTATCGA
TGTGATGTTTGTGACAAAACGTTTTCTATTGGCAGCTCTTTAAAGGATCATAAAAAAATT
CACAGTGGGAAGAAACCATACAAATGTGATTTGTGCACCAGTTCTTTCTCTAACAAGAAC
GCTTTAAGCAAACACAAAAGAATTCATAGTGACAAAAAATTGTACAAGTGTGAGATATGT
GATAAGGCATTCAATTTTATTGGCAACTTAACTGTACATTTAAGAGTACATACAGAGGAA
AGGCCATACATCTGTAATTATTGTGAAAAAGCATTTAAAACTGCTGGCAATTTAACTGTG
CATAAAAGAATTCACACTGGAGAGAAACCTTACAAATGTCTTGTATGTGACAAAACATTT
AGGCAAACTAGTAGTTTAAAAGACCACTCTGTAATGCACACCAACAAAACCCCTTTTCAA
TGTCACCTTTGTGGGAAATGGTATTCGCGGTCGAACTATTTAACTGACCATCTAAAGCGC
CATATTGCTCAAAAAGCAAAGAAAATTAAATCTAAGAGAAGACTTCGTTGTAATGATTGT
AATCGATGCTTTAAACACCCGGGAAACTTAAAAATGCATCAGAAAATTCACACTCAAGAC
AATTCCTTTGAATGCAAAGTGTGTAAGCAATCCCTTGAAACTGAAAGCAGTTTGACCGTT
CATTTAAAAACACACACTGACGAGAGGCCATTCAATTGCCTTACATGCATAAAATCGTTT
GCGAGTTCTGATGAATTAAAAAGCCATAGGAGAAGTCATGAATGCGCTCCTCCGTTCCGT
TGTAAGATATGCGACAAGTTGTTTTCCAGTTTCAACGCTGTGAAGCGTCACCAAGTAGTT
CACACTGGAGAGACCAACTATCACTGCCACATTTGTTCGAAAGCTTTTAATGTGGAGTGC
AATTTAAAAACACACTTAAAAATTCACAATCCGGTGCCTCGCTCCAAACCTTCTGAAGTC
AACAGACCGAAATGCAACATATGTGACAAAACATTTCAAAATGAAAAAAATCTTAAGCAT
CATAAACGTATTCACCTCAAAGAAAAACCCTACAAATGTCTTTTGTGTGAAAAATCATTC
ACCCAAGCAGTTCAACTGCGCTGGCACCATGACATCCACATGAATATAAAACGTCACAAA
TGTGATATTTGTGAGAAAACCTTTTATCAAAAAGGTCAGTTAAAAAAACATCAGAGGATT
CATAGTGGGAAGAGGGACTACAAATGTACCGTTTGCGATAAGTCGTTTTACCAATCTTGC
AACTTAAGGTCTCATCTAATAACCCACAGTAAAGTGAACTCTTACCAATGTGGCATCTGT
GACAAAAGTTTCAAGTTTCCTGTTGGCTTAAGGAAGCATGTGGTCACCCACAATGAAAAA
CTTTTCAAGTGTGATGTCTGCCCAAAGTCGTTCGTTACGGAAAGGCAATTAAAATTACAT
CAAACGATGCACGCTGACCGGAAACCATTCGAATGCACTGTCTGTGGTAGATCGTTCAAC
CGTGTTGATAATTTCAGATTCCATCAAAAACAACACGGACATAAAGTTTAG
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[22-73] 1.42E-14 - T[60-116] 3.06E-20 - T[106-138] 1.43E-7 - T[143-200] 6.0E-22 - T[189-241] 4.48E-14 - T[255-305] 1.27E-10 - T[295-348] 5.57E-13 - T[338-389] 7.21E-14 - T[404-453] 4.82E-13 - T[439-496] 8.88E-17 - T[495-551] 1.02E-13 - T[540-592] 1.32E-14 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[23-50] 13.193 - T[51-78] 16.768 - T[79-106] 15.708 - T[107-134] 13.277 - T[135-162] 15.355 - T[163-190] 16.373 - T[191-218] 13.588 - T[219-246] 12.03 - T[255-282] 12.508 - T[283-310] 13.588 - T[311-338] 11.718 - T[339-366] 12.736 - T[367-389] 11.074 - T[403-430] 13.671 - T[431-458] 11.24 - T[459-486] 14.482 - T[487-514] 11.572 - T[515-537] 9.91 - T[542-569] 13.339 - T[570-596] 11.531 |
| SMART |
Znf_C2H2_type (IPR013087) - T[23-45] 0.0076 - T[51-73] 0.0074 - T[79-101] 0.0029 - T[107-129] 7.5E-4 - T[135-157] 0.0013 - T[163-185] 3.7E-4 - T[191-213] 0.0067 - T[219-241] 0.0072 - T[255-277] 0.0055 - T[283-305] 0.011 - T[311-333] 0.09 - T[339-361] 0.0034 - T[367-389] 0.035 - T[403-425] 0.0039 - T[431-453] 0.038 - T[459-481] 3.3E-4 - T[487-509] 0.0023 - T[515-537] 0.0051 - T[542-564] 7.3E-4 - T[570-592] 0.0024 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[25-45] . - T[53-73] . - T[81-101] . - T[109-129] . - T[137-157] . - T[165-185] . - T[193-213] . - T[221-241] . - T[257-277] . - T[285-305] . - T[313-333] . - T[341-361] . - T[369-389] . - T[405-425] . - T[433-453] . - T[461-481] . - T[489-509] . - T[517-537] . - T[544-564] . - T[572-594] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN845_HUMAN | 39.792 % | 441 | 5.68E-144 |
| ZFP62_HUMAN | 40.702 % | 430 | 1.44E-140 |
| ZN624_HUMAN | 39.041 % | 424 | 5.91E-139 |
