- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1925218-1933994.16321.t
Possible name(s)
SGSM3; TBC1D2; TBC1D2B
Gene model
Location
R0 [1,926,025 / 1,933,242]
Amino acid sequence
Length: 654
>Cisavi.CG.ENS81.R0.1925218-1933994.16321.p
GVPLNEEPQHKLQWQAHLEFALNSTVEDFSWANMKSSLPRSEKLQQLVSMGVPHSMRPQV
WMRLCGAIEKKHQSEITYDEIVEASLCANTSSSAEIEKDLLRTMPNNACFSSADSPGVDK
LQRGISKLRSWRWFYPDGLITAHLLLFMKEEDAFWMMCSTFDHLLPSSYYRHNLCGVHAD
QRVLRQLVAQYLPNVEKSLNDHDIGIIGNNIFKLSLITLHWFITLFAGVLHIKVLLRVWD
AFFLDGSIVMFKVAMGMLKMKEEMFGEVENSAEIFNTLSDIPSLMDDADMLLQAAQRTAG
SLSQMVLDTHRKKHEAYLLGEGGAEVSTLSHVVILYSLHHTYSSTVDEEFENMKAKNIKQ
TELVSSLKQAIQMIIKHFQTMEHQQDTDVSVDYSSESHTHDHEHYMSVGHQRRQRARALL
DFQRSDDDELGFRKNDIITIISMKDEHCWVGELNGLQGWFPAKFVELLDERSKTYTSAGD
GSVNKSIVDLVRGVLCPALAAIFEHGLRRPVLLGSACHPWQFVEEAAAHEIEKDFDSVFS
RLVLCKTFRLDDDGKVLTPEELLYRCIQAVNMSHNSAHAQMDVKLRSLVCYGLNEQVLHM
WLESLCSSVGVVRKWYHPWSYLLSPGWVQIKCELRLLSKFTFYLPPDWELPKTK
Nucleotide sequence
Length: 1,962
>Cisavi.CG.ENS81.R0.1925218-1933994.16321.t
GGTGTTCCATTAAATGAAGAACCACAGCACAAGCTACAATGGCAAGCTCATCTTGAGTTT
GCTCTCAATTCCACAGTTGAAGATTTCAGTTGGGCCAACATGAAGAGTTCGTTACCGAGA
TCAGAGAAGTTGCAGCAGTTGGTGTCAATGGGGGTTCCCCACAGCATGAGGCCACAGGTG
TGGATGCGGTTGTGTGGAGCAATTGAGAAGAAGCATCAGAGCGAGATCACGTATGATGAG
ATCGTCGAGGCGAGTTTGTGCGCCAACACCAGCTCATCCGCAGAGATAGAGAAAGATCTA
TTAAGAACGATGCCAAACAATGCCTGTTTCTCATCCGCTGATAGCCCTGGAGTTGACAAA
TTACAGCGCGGAATATCTAAGCTCAGGAGTTGGCGTTGGTTTTACCCTGATGGATTGATT
ACTGCGCATCTCTTGCTGTTCATGAAGGAGGAGGACGCATTCTGGATGATGTGCTCCACG
TTCGATCACCTCCTCCCATCCTCGTACTACCGACACAATCTCTGCGGAGTCCATGCCGAC
CAGCGCGTGCTACGCCAACTTGTGGCACAATATCTGCCTAATGTGGAGAAATCGTTGAAC
GATCATGACATTGGTATAATAGGAAACAATATTTTCAAATTGTCGCTGATTACTTTGCAC
TGGTTCATCACTCTATTTGCTGGCGTGCTGCACATCAAGGTATTACTTCGTGTGTGGGAT
GCTTTCTTCTTGGATGGTTCTATTGTCATGTTCAAAGTTGCCATGGGAATGCTTAAAATG
AAGGAGGAGATGTTTGGGGAGGTGGAGAACTCTGCGGAAATCTTCAACACTCTCTCTGAT
ATCCCGTCGCTCATGGATGATGCAGATATGCTGCTGCAGGCTGCTCAGCGAACGGCTGGC
TCCTTGTCACAGATGGTGTTGGACACACACAGGAAGAAACATGAAGCTTATTTGCTGGGG
GAAGGTGGGGCAGAGGTGAGTACATTATCACATGTTGTTATCTTATATTCATTGCATCAT
ACATACAGTTCAACTGTTGATGAAGAATTTGAAAATATGAAGGCAAAAAATATTAAGCAA
ACCGAGTTGGTTTCAAGTCTGAAACAAGCGATCCAGATGATTATAAAGCATTTCCAGACC
ATGGAGCATCAGCAAGATACTGATGTATCTGTGGATTATTCAAGCGAAAGTCATACACAC
GACCACGAGCATTACATGTCGGTCGGCCACCAGAGGCGACAAAGAGCACGGGCACTTTTG
GATTTCCAACGAAGTGATGACGATGAACTTGGATTCAGGAAGAATGACATCATCACTATC
ATTAGCATGAAAGATGAGCACTGCTGGGTCGGGGAGTTAAATGGTCTGCAAGGTTGGTTT
CCAGCTAAGTTTGTTGAACTTCTGGATGAAAGAAGCAAAACGTACACCTCGGCAGGGGAT
GGAAGTGTGAACAAGTCGATAGTGGATCTGGTGCGCGGAGTGTTGTGCCCTGCGCTTGCA
GCAATATTCGAACACGGGCTGCGACGACCTGTGCTGCTGGGCAGTGCTTGTCATCCGTGG
CAGTTTGTTGAAGAGGCAGCAGCGCACGAGATCGAAAAAGATTTCGATTCCGTCTTTTCA
CGACTTGTTCTCTGCAAAACTTTTCGCCTTGATGATGATGGGAAAGTGCTCACTCCAGAA
GAACTACTATACAGGTGCATACAAGCGGTGAATATGTCACACAACTCAGCACATGCTCAG
ATGGATGTCAAATTACGATCACTTGTGTGCTATGGCCTAAATGAACAAGTCTTACATATG
TGGTTGGAATCACTGTGTTCATCGGTGGGGGTGGTTAGGAAGTGGTATCACCCATGGTCG
TACCTCCTCTCTCCGGGGTGGGTGCAGATCAAGTGCGAACTACGTCTCTTGTCCAAGTTC
ACCTTCTACCTCCCACCTGACTGGGAGCTCCCGAAAACCAAA
| SUPERFAMILY |
Rab-GTPase_TBC_sf (IPR035969) - T[33-195] 2.88E-28 - T[174-295] 6.8E-19 |
| SMART |
Rab-GTPase-TBC_dom (IPR000195) - T[48-269] 1.3E-34 |
| ProSiteProfiles |
Rab-GTPase-TBC_dom (IPR000195) - T[51-246] 23.646 |
| Pfam |
Rab-GTPase-TBC_dom (IPR000195) - T[55-263] 4.0E-31 |
| ProSiteProfiles |
SH3_domain (IPR001452) - T[411-470] 13.106 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[413-472] 4.59E-19 |
| SMART |
SH3_domain (IPR001452) - T[414-469] 6.7E-19 |
| CDD |
SGSM3_SH3 (IPR035833) - T[415-467] 1.5214E-32 |
| Pfam |
SH3_domain (IPR001452) - T[417-462] 4.1E-12 |
| ProSiteProfiles |
Run_dom (IPR004012) - T[486-649] 27.344 |
| SUPERFAMILY |
Run_dom_sf (IPR037213) - T[495-526] 8.89E-13 - T[563-644] 8.89E-13 |
| Pfam |
Run_dom (IPR004012) - T[495-647] 2.0E-28 |
| SMART |
Run_dom (IPR004012) - T[585-647] 1.5E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SGSM3_HUMAN | 58.146 % | 798 | 0 |
| TBD2B_HUMAN | 29.139 % | 130 | 2.12E-31 |
| TBD2A_HUMAN | 31.502 % | 140 | 1.96E-34 |
