- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1881089-1892983.16037.t
Possible name(s)
SGSM1; SGSM2; TBC1D15
Gene model
Location
R0 [1,881,134 / 1,892,983]
Amino acid sequence
Length: 1,051
>Cisavi.CG.ENS81.R0.1881089-1892983.16037.p
HRTCIADADKHENLLRLLKCQVKAIMEEAVTKKFVHEESTHVLRLCGTVELCFLDGLKKR
VAGFLRYNKIAALFTKVGKVLPEVATLVANVEDLESNINKTNQADEARNSSSNSKKHLWI
RVALTSKLLDQIAEHLVDNNKKYYESSSIMADPSRGKILSSMLVGPCALDFTKMKTHDHY
WSDPPAGELLQRHRLHSRHGSPSSPGRRPALHFTPLRHHSSSDSIERGTSFRDYVESLHQ
NSKMMLLYGKNNVAVQPREDVGPIPGYLSLHQEASSMLIKWTPNQLMNTQEEDGDTSSYW
EFAICVDVRDIVYLHCHQQLDKSGTLVLVGQDGVQWPPIRFPPGGHLLTFLSCIETGLLP
HGHLDPPLWCEKGKGKVFPRLQRRSNRKSSIESKEATDFVFRVSSSSDSSSFDLMNPVST
ISHLWKPPEPRRPTERTNGSKSSSRSSLKVLCDTMRRQIISRAFYGWLAHCRHLTTVRTH
LSGMVHPDLMLPDEPTDATMGVNQTTWAELMQDGKVLVGSELMRLTYFGGVAHQLRHVVW
AFLLGHYPPDSDVADRAAIDTRTKHQYELTMQQWMAVEDIINQVFPVCCRYPMFSIVTPY
SLSLPHILYRYPIFSIVTPYSLSLPHILYLLRQQSSNLSDVFTLEEVREDAKYEVIHEVA
QEDQAVRADSVPQEDTRSPESALREDDLIAQDDPVAQDEPVAQNDQVAQEAQVPEKDPVA
QDDPVAQEAQVPEKDPVAQDDPVAQNDQVAQEAQVPRDDPVAQEAQVPEKDPVAQDDPVA
QDDPVAQDDPVAQDDPVAQGDPVEPTAAIDFSFNFNPTQIDISFNPLATELLDSFALNLH
RIDKDVQRCDRNHWYFSEEGNLTKLRNIMSCYVWLHLDVGYMQGMCDLAAPLLVVMDDEL
VYGCFVLIMERVGRNFPNGGAMDSHFANMRSLVQILDAELFEHMRKNGDFTHFYFSYRWF
LLDFKRELSYDGDVFSVWERIWAANYCSSHHFVLFFALAMLQIYRDIILENDMDFTDIIK
FFNEMAERHDASKLISLAQQLVAQVQQMIQK
Nucleotide sequence
Length: 3,298
>Cisavi.CG.ENS81.R0.1881089-1892983.16037.t
CACAGAACTTGTATTGCAGATGCCGATAAACATGAAAATCTCTTGCGACTTCTTAAATGC
CAGGTTAAAGCTATTATGGAAGAAGCTGTCACCAAGAAATTTGTGCATGAAGAGAGCACC
CATGTATTGAGGCTATGCGGCACTGTGGAACTGTGCTTCCTGGATGGCTTGAAGAAACGA
GTTGCTGGATTTCTCCGCTACAACAAAATAGCAGCTTTGTTCACAAAGGTGGGGAAAGTG
TTGCCAGAAGTGGCGACGTTGGTTGCTAATGTGGAAGATCTTGAATCGAACATCAACAAA
ACAAACCAAGCAGACGAAGCTCGGAACTCCAGTTCAAACAGCAAGAAACATCTGTGGATA
CGAGTTGCGCTAACGAGCAAGCTGCTGGATCAAATCGCTGAACACTTGGTGGACAACAAC
AAGAAGTATTATGAATCATCTTCCATCATGGCTGACCCTTCCAGAGGAAAAATTCTTTCT
TCAATGCTCGTTGGCCCATGTGCACTGGACTTCACTAAAATGAAGACGCACGATCATTAC
TGGTCAGATCCACCAGCGGGGGAGCTATTGCAGAGGCATCGACTACACAGCAGACACGGC
TCGCCAAGTTCCCCGGGACGACGCCCAGCGCTCCACTTCACCCCGCTCCGCCACCATTCC
TCCTCTGATTCCATCGAACGCGGGACATCGTTCAGGGATTACGTGGAGTCGCTTCATCAG
AACTCCAAGATGATGCTTTTGTATGGGAAGAACAACGTGGCTGTGCAACCGCGTGAAGAT
GTTGGTCCGATCCCAGGCTACCTCTCCCTCCACCAAGAAGCAAGCTCCATGCTGATCAAG
TGGACTCCCAATCAACTCATGAACACACAGGAGGAGGATGGGGACACCAGTTCATACTGG
GAGTTCGCGATCTGCGTTGATGTCCGGGACATTGTGTATCTTCATTGCCATCAGCAATTG
GATAAAAGTGGGACATTGGTATTGGTTGGTCAAGATGGCGTTCAGTGGCCTCCCATCCGA
TTCCCCCCCGGCGGCCACCTCCTCACCTTCTTATCCTGCATCGAGACCGGGTTGCTGCCT
CACGGCCATCTTGACCCACCACTCTGGTGTGAGAAGGGAAAGGGGAAAGTCTTCCCGAGG
CTCCAACGTCGTTCCAACAGAAAGTCGAGCATTGAATCGAAGGAAGCAACCGACTTTGTG
TTCCGAGTGAGCTCCTCTTCCGACAGCAGCTCGTTCGACCTCATGAACCCAGTATCCACC
ATTTCCCATCTGTGGAAGCCTCCTGAACCCAGGCGGCCCACAGAGCGCACAAACGGCTCC
AAGAGTTCTTCCAGGTCATCACTCAAAGTTTTATGCGACACGATGCGCCGACAAATCATT
TCCCGAGCGTTCTACGGCTGGCTGGCTCACTGCCGCCACCTAACCACCGTCCGAACTCAC
CTTTCGGGGATGGTACACCCGGACCTCATGCTCCCTGACGAGCCTACTGATGCTACTATG
GGTGTCAATCAAACTACGTGGGCGGAGCTAATGCAGGATGGAAAGGTATTGGTGGGAAGT
GAATTGATGAGACTCACATACTTTGGTGGCGTGGCTCATCAGCTGCGGCACGTGGTGTGG
GCTTTCCTGCTCGGCCACTACCCACCTGACAGTGATGTGGCTGATCGTGCTGCCATCGAC
ACGCGCACCAAGCATCAATACGAGCTCACCATGCAGCAGTGGATGGCTGTGGAAGATATC
ATCAACCAGGTATTCCCTGTTTGCTGCCGATACCCCATGTTCTCTATCGTTACCCCATAT
TCTCTATCGTTACCCCATATTCTCTATCGTTACCCCATATTCTCTATCGTTACCCCATAT
TCTCTATCGTTACCCCATATTCTCTATCTTCTACGTCAGCAATCATCCAACTTGAGTGAT
GTATTCACATTGGAAGAGGTTCGTGAAGATGCCAAATATGAAGTGATTCACGAGGTGGCT
CAGGAGGACCAAGCTGTTCGTGCGGATTCGGTACCTCAGGAGGACACCAGGTCACCAGAG
AGCGCACTGAGAGAAGATGATCTAATTGCGCAAGATGATCCAGTTGCACAGGATGAACCA
GTTGCACAGAATGACCAAGTCGCACAGGAAGCCCAGGTTCCAGAAAAGGACCCAGTTGCA
CAGGATGACCCTGTTGCACAGGAAGCCCAGGTTCCAGAAAAGGACCCAGTTGCACAGGAT
GACCCAGTTGCACAGAATGACCAAGTTGCACAGGAAGCCCAGGTTCCACGGGATGACCCA
GTGGCACAGGAAGCCCAGGTTCCAGAAAAGGACCCAGTTGCACAGGATGACCCTGTTGCA
CAGGATGACCCTGTTGCACAGGATGACCCAGTGGCACAGGATGACCCTGTTGCACAGGGA
GACCCAGTGGAACCGACAGCAGCCATTGATTTTAGTTTTAATTTTAATCCAACACAGATT
GATATTAGTTTTAATCCATTGGCTACTGAACTGCTGGACTCATTTGCACTGAACCTCCAT
CGCATCGATAAAGATGTGCAACGCTGTGATCGTAACCACTGGTATTTCTCCGAGGAAGGA
AATCTCACCAAGTTGCGCAATATCATGTCGTGTTACGTCTGGCTGCACCTTGATGTAGGG
TATATGCAGGGAATGTGTGACTTGGCTGCTCCTCTGCTGGTGGTGATGGATGATGAGTTG
GTGTACGGATGCTTCGTGCTCATCATGGAACGGGTGGGGAGAAACTTCCCCAACGGTGGC
GCCATGGATTCCCACTTCGCCAATATGAGGTCGCTGGTGCAGATTCTCGATGCCGAGTTG
TTCGAACACATGCGCAAGAACGGGGATTTCACTCATTTCTACTTCTCATACCGCTGGTTT
CTTCTGGATTTCAAACGAGAGTTGTCATATGATGGGGATGTGTTCAGTGTGTGGGAACGC
ATTTGGGCGGCAAACTACTGCTCGTCGCATCACTTTGTGCTCTTCTTTGCGCTTGCCATG
CTGCAAATATACAGGGACATCATCCTGGAGAATGACATGGATTTCACTGATATTATCAAG
TTCTTCAATGAAATGGCGGAGCGACACGACGCGTCGAAGTTGATATCGCTCGCTCAGCAG
TTGGTCGCGCAAGTTCAACAAATGATTCAGAAGTAACTCTTCTGTGAGATGAAGTGCAAT
ACGCGAGGTGTAATTATTCCGGCGCCCTCCCTTTTATCATCGTTCCGTGCAATTCATGTT
TTACTGTGTCGTCCTTGCACATATATATTGCTGTTAGTTGCCATGCGATTTGCTGCGC
| SUPERFAMILY |
Run_dom_sf (IPR037213) - T[9-172] 3.14E-29 |
| ProSiteProfiles |
Run_dom (IPR004012) - T[36-179] 21.465 |
| Pfam |
Run_dom (IPR004012) - T[44-176] 9.9E-30 |
| SMART |
Run_dom (IPR004012) - T[116-176] 8.4E-13 |
| CDD |
SGSM1/2 (IPR037745) - T[246-403] 1.58843E-80 |
| SUPERFAMILY |
Rab-GTPase_TBC_sf (IPR035969) - T[506-569] 6.28E-40 - T[825-943] 6.28E-40 - T[920-1042] 6.28E-27 |
| ProSiteProfiles |
Rab-GTPase-TBC_dom (IPR000195) - T[530-985] 26.961 |
| SMART |
Rab-GTPase-TBC_dom (IPR000195) - T[797-1012] 5.7E-34 |
| Pfam |
Rab-GTPase-TBC_dom (IPR000195) - T[838-1008] 9.4E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SGSM1_HUMAN | 43.875 % | 895 | 0 |
| SGSM2_HUMAN | 45.455 % | 541 | 2.2E-176 |
| TBC15_HUMAN | 31.25 % | 119 | 2.42E-27 |
