- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1818675-1820985.15830.t
Possible name(s)
SRSF12; SRSF2; SRSF8
Gene model
Location
R0 [1,818,674 / 1,820,985]
Amino acid sequence
Length: 178
>Cisavi.CG.ENS81.R0.1818675-1820985.15830.p
MSRGGRPPPGLDNMVSLKVDNLTYRTSPETLKRAFEKYGDVGDVYIPRDRYSRESRGFAF
VRFYDKRDAEDAMDSMDGKEMDGRELRVAMARYGRPTEQSRDSGRRGGGGYGGSRRPRRR
SYSRSRSRSRGRRYSGSRSRSRSRSYHRDRNRSRSRSVDRRSRSGSNRRSVSRDRNGD
Nucleotide sequence
Length: 744
>Cisavi.CG.ENS81.R0.1818675-1820985.15830.t
ATTTGTATAAAGGAAATTGTTAAAAATGTCTCGCGGCGGTAGACCACCACCAGGCTTGGA
CAACATGGTGTCATTGAAAGTTGACAACCTAACTTACCGAACCTCACCTGAGACACTGAA
GCGTGCTTTTGAAAAGTATGGCGACGTTGGAGATGTATACATTCCACGGGATAGGTATTC
CCGTGAGAGCCGAGGCTTTGCGTTCGTTCGGTTCTACGACAAACGGGATGCGGAGGATGC
GATGGACAGCATGGATGGGAAGGAGATGGATGGAAGGGAGCTCAGAGTGGCAATGGCACG
CTATGGACGTCCAACTGAGCAAAGTAGGGACTCGGGGAGAAGAGGGGGAGGAGGTTATGG
TGGATCGAGGAGACCCAGGCGAAGAAGTTACTCCCGCTCAAGGTCGAGGTCGCGAGGTCG
TCGTTATTCTGGGAGTCGTTCCAGATCGAGGAGTCGTTCATATCACAGAGATCGCAACCG
AAGTCGAAGCAGATCTGTAGACAGAAGGAGTCGCTCTGGCTCCAACCGAAGATCAGTATC
CAGGGACAGGAATGGAGATTGATTGGAGATATCGCCGGGTAATCTAATATGCCTACATAC
TACTCTGCCACATAAACATTCCTACGTGTCAATAATTCAAACTCGGTGGACTTTTATATA
AAGTTTGAAGTAACAGTTTTGTAGATAAACCTTGGTAACAAACATGCTGTATCACCCCCC
AATAAATGTGAATATTTCGAGTAA
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[11-120] 2.42E-31 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[12-130] 2.9E-29 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[15-93] 19.4 |
| SMART |
RRM_dom_euk (IPR003954) - T[16-89] 0.0095 |
| SMART |
RRM_dom (IPR000504) - T[16-89] 1.7E-24 |
| Pfam |
RRM_dom (IPR000504) - T[18-87] 9.1E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRSF2_HUMAN | 79.787 % | 159 | 9.93E-50 |
| SRSF8_HUMAN | 70.33 % | 142 | 2.79E-42 |
| SRS12_HUMAN | 45.361 % | 84 | 5.19E-20 |
