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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Boleac.CG.SB_v3.S0.g...' > 
  3. EST 'AHC0AAA222YK20_RM1' > 
  4. Transcript 'Cisavi.CG.ENS81.R0.1...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R0.1706014-1723939.15672.t

Possible name(s)

NOTCH1; NOTCH2; NOTCH3

Gene model

Cisavi.CG.ENS81.R0.1706014-1723939

Location

R0 [1,709,059 / 1,715,745]

Sequences

Amino acid sequence

Length: 173

>Cisavi.CG.ENS81.R0.1706014-1723939.15672.p
GACTDGVNSYTCTCTAGWQGTNCDSNINDCAANPCVNGACTDGVNSYTCTCTAGWQGTNC
DSNIDDCAANPCVNGACTDGVNSYTCTCTAGWQGTNCDSNIDDCAANPCMNGACTDGVNS
YTCTCTAGWQGTNCDSNIDDCSGNPCVNGACTDGVNSYTCTCTAGWQGTNCDS

Nucleotide sequence

Length: 522

>Cisavi.CG.ENS81.R0.1706014-1723939.15672.t
ACGGGGCTTGCACTGATGGTGTTAACTCGTATACCTGCACCTGTACTGCTGGATGGCAGG
GAACCAACTGTGATTCAAATATAAATGATTGTGCTGCTAATCCTTGTGTGAATGGAGCTT
GCACTGATGGTGTTAACTCGTATACCTGCACCTGTACTGCTGGATGGCAGGGTACCAACT
GTGATTCAAATATAGACGATTGCGCTGCTAATCCTTGTGTGAATGGAGCTTGCACTGATG
GTGTTAACTCGTATACCTGCACCTGTACTGCTGGATGGCAGGGAACCAACTGTGATTCAA
ATATAGATGATTGTGCTGCTAATCCTTGTATGAATGGAGCTTGCACTGATGGTGTTAACT
CGTATACCTGCACCTGTACTGCTGGATGGCAGGGAACCAACTGTGATTCAAATATAGATG
ATTGTTCTGGTAATCCTTGTGTGAATGGAGCTTGCACTGATGGTGTTAACTCGTATACCT
GCACCTGTACTGCTGGATGGCAGGGAACCAACTGTGATTCAA

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[1-24] 13.121 - T[26-61] 18.253 - T[63-98] 18.666 - T[100-135] 18.989 - T[137-172] 18.669
Pfam
EGF-like_CS (IPR013032) - T[1-18] 3.3E-4 - T[146-166] 2.0E-5
SMART
EGF-like_dom (IPR000742) - T[1-24] 72.0 - T[29-61] 1.2E-5 - T[66-98] 1.2E-5 - T[103-135] 4.4E-6 - T[140-172] 3.5E-5
SMART
EGF-like_Ca-bd_dom (IPR001881) - T[1-24] 0.12 - T[26-61] 1.6E-9 - T[63-98] 1.0E-9 - T[100-135] 3.6E-10 - T[137-172] 3.2E-9
ProSitePatterns
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[3-14] . - T[40-51] . - T[77-88] . - T[114-125] . - T[151-162] .
ProSitePatterns
EGF-like_CS (IPR013032) - T[12-23] . - T[12-23] . - T[49-60] . - T[49-60] . - T[86-97] . - T[86-97] . - T[123-134] . - T[123-134] . - T[160-171] . - T[160-171] .
Pfam
EGF-like_dom (IPR000742) - T[30-58] 9.5E-6 - T[67-95] 9.5E-6 - T[104-132] 3.1E-7
SUPERFAMILY
Growth_fac_rcpt_cys_sf (IPR009030) - T[50-172] 7.85E-12
ProSitePatterns
EGF_Ca-bd_CS (IPR018097) - T[137-160] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NOTC3_HUMAN 46.243 % 176 1.41E-51
NOTC2_HUMAN 47.701 % 178 3.68E-52
NOTC1_HUMAN 48.276 % 176 1.1E-51