- Transcript 'Cisavi.CG.ENS81.NC_0...' >
- EST 'AHC0AAA234YI11_RM1' >
- Transcript 'Cisavi.CG.ENS81.NC_0...' >
- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1706014-1723939.15670.t
Possible name(s)
NOTCH1; NOTCH2; NOTCH3
Gene model
Location
R0 [1,706,013 / 1,715,745]
Amino acid sequence
Length: 268
>Cisavi.CG.ENS81.R0.1706014-1723939.15670.p
GACTDGVNSYTCTCTAGWQGTNCDSNINDCAANPCVNGACTDGVNSYTCTCTAGWQGTNC
DSNIDDCAANPCVNGACTDGVNSYTCTCTAGWQGTNCDQDINECSATNNCAVCQNLVPSY
FCVCEISSYEGILCTWAVIGTTTYRVPATTTTTSRIAAIAICAGLDEGGGFLGEPLAANL
PTILTKVVARSTFVSGFMWLNVVRQSGSTWVYGATGTVATTNFEFEANVLDNCAVMRVSD
FKWIIVSCTSFTADILCQRAITGKVVSP
Nucleotide sequence
Length: 951
>Cisavi.CG.ENS81.R0.1706014-1723939.15670.t
ACGGGGCTTGCACTGATGGTGTTAACTCGTATACCTGCACCTGTACTGCTGGATGGCAGG
GAACCAACTGTGATTCAAATATAAATGATTGTGCTGCTAATCCTTGTGTGAATGGAGCTT
GCACTGATGGTGTTAACTCGTATACCTGCACCTGTACTGCTGGATGGCAGGGTACCAACT
GTGATTCAAATATAGATGATTGCGCTGCTAATCCTTGTGTGAATGGAGCTTGCACTGATG
GTGTTAACTCGTATACCTGCACTTGTACTGCTGGATGGCAGGGAACCAACTGTGATCAAG
ATATTAATGAATGTTCCGCGACAAATAATTGTGCCGTTTGCCAAAATTTGGTTCCTTCGT
ATTTCTGTGTCTGTGAAATATCAAGCTACGAAGGAATTTTATGCACATGGGCGGTTATCG
GTACAACGACATATCGGGTGCCTGCCACCACCACTACCACCAGCCGAATCGCTGCAATCG
CTATTTGTGCTGGTCTTGATGAAGGGGGTGGTTTCTTAGGTGAACCCCTTGCTGCCAACT
TGCCAACTATTCTCACAAAAGTTGTCGCCAGAAGCACATTTGTGTCTGGTTTCATGTGGC
TTAATGTGGTTCGACAATCAGGATCAACATGGGTGTATGGAGCAACCGGTACTGTCGCTA
CCACCAACTTTGAATTTGAGGCGAATGTGTTGGACAACTGTGCAGTGATGAGAGTCAGTG
ATTTCAAATGGATCATTGTATCTTGCACCAGCTTCACCGCAGATATTTTGTGCCAACGCG
CAATTACCGGCAAAGTAGTGTCTCCTTAAACGTATTAAATTTTCTATTTTTATTTATTTC
GTTTTGCAACTGTTGCCCATACTCGACTGCCAATTGTGAATATTATGTTTTTTTTTATTT
GCGTGAACAGAATTTTAAACATAATAAAAATATGATCGAGTGTCAAACATA
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[1-24] 0.12 - T[26-61] 1.6E-9 - T[63-98] 1.0E-9 - T[100-135] 0.0071 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[1-24] 13.121 - T[26-61] 18.253 - T[63-98] 18.666 - T[100-135] 10.51 |
| Pfam |
EGF-like_CS (IPR013032) - T[1-18] 5.8E-4 |
| SMART |
EGF-like_dom (IPR000742) - T[1-24] 72.0 - T[29-61] 1.2E-5 - T[66-98] 1.2E-5 - T[103-135] 23.0 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[3-14] . - T[40-51] . - T[77-88] . - T[113-124] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[12-23] . - T[12-23] . - T[49-60] . - T[49-60] . - T[86-97] . - T[86-97] . |
| Pfam |
EGF-like_dom (IPR000742) - T[30-58] 1.8E-5 - T[67-95] 1.8E-5 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[63-86] . |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[150-261] 4.72E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOTC3_HUMAN | 43.885 % | 121 | 5.76E-31 |
| NOTC2_HUMAN | 45.522 % | 123 | 1.03E-31 |
| NOTC1_HUMAN | 47.101 % | 122 | 3.47E-31 |