Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C2.729.v1....' > 
  2. Transcript 'Cisavi.CG.ENS81.R0.1...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R0.1706014-1723939.15668.t

Possible name(s)

NOTCH1; NOTCH2; NOTCH3

Gene model

Cisavi.CG.ENS81.R0.1706014-1723939

Location

R0 [1,706,013 / 1,716,258]

Sequences

Amino acid sequence

Length: 207

>Cisavi.CG.ENS81.R0.1706014-1723939.15668.p
FNIDDCAANPCVNGACTDGVNSYTCTCTAGWQGTNCDQDINECSATNNCAVCQNLVPSYF
CVCEISSYEGILCTWAVIGTTTYRVPATTTTTSRIAAIAICAGLDEGGGFLGEPLAANLP
TILTKVVARSTFVSGFMWLNVVRQSGSTWVYGATGTVATTNFEFEANVLDNCAVMRVSDF
KWIIVSCTSFTADILCQRAITGKVVSP

Nucleotide sequence

Length: 1,070

>Cisavi.CG.ENS81.R0.1706014-1723939.15668.t
CTTGTGTGAATGGAGCTTGCACTGATGGTGTTAACTCGTATACCTGCACCTGTACTGCTG
GATGGCAGGGAACCAACTGTGATTCAGCTATAACCAATTGTGCTGGTAATCCTTGTGTGA
ACGGGGCTTGCACTGATGGTGTTAACTCGTATACCTGCACCTGTACTGCTGGATGGCAGG
GAACCAACTGTGATTCAAATATAGATGATTGCGCTGCTAATCCTTGTGTGAATGGAGCTT
GCACTGATGGTGTTAACTCGTATACCTGCACCTGTACTGCTGGATGGCAGGGAACCAACT
GTGATTCAATATAGATGATTGCGCTGCTAATCCTTGTGTGAATGGAGCTTGCACTGATGG
TGTTAACTCGTATACCTGCACTTGTACTGCTGGATGGCAGGGAACCAACTGTGATCAAGA
TATTAATGAATGTTCCGCGACAAATAATTGTGCCGTTTGCCAAAATTTGGTTCCTTCGTA
TTTCTGTGTCTGTGAAATATCAAGCTACGAAGGAATTTTATGCACATGGGCGGTTATCGG
TACAACGACATATCGGGTGCCTGCCACCACCACTACCACCAGCCGAATCGCTGCAATCGC
TATTTGTGCTGGTCTTGATGAAGGGGGTGGTTTCTTAGGTGAACCCCTTGCTGCCAACTT
GCCAACTATTCTCACAAAAGTTGTCGCCAGAAGCACATTTGTGTCTGGTTTCATGTGGCT
TAATGTGGTTCGACAATCAGGATCAACATGGGTGTATGGAGCAACCGGTACTGTCGCTAC
CACCAACTTTGAATTTGAGGCGAATGTGTTGGACAACTGTGCAGTGATGAGAGTCAGTGA
TTTCAAATGGATCATTGTATCTTGCACCAGCTTCACCGCAGATATTTTGTGCCAACGCGC
AATTACCGGCAAAGTAGTGTCTCCTTAAACGTATTAAATTTTCTATTTTTATTTATTTCG
TTTTGCAACTGTTGCCCATACTCGACTGCCAATTGTGAATATTATGTTTTTTTTTATTTG
CGTGAACAGAATTTTAAACATAATAAAAATATGATCGAGTGTCAAACATA

InterProScan

ProSitePatterns
EGF_Ca-bd_CS (IPR018097) - T[2-25] .
SMART
EGF-like_Ca-bd_dom (IPR001881) - T[2-37] 1.0E-9 - T[39-74] 0.0071
ProSiteProfiles
EGF-like_dom (IPR000742) - T[2-37] 18.666 - T[39-74] 10.51
SMART
EGF-like_dom (IPR000742) - T[5-37] 1.2E-5 - T[42-74] 23.0
Pfam
EGF-like_dom (IPR000742) - T[6-34] 1.2E-5
ProSitePatterns
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[16-27] . - T[52-63] .
ProSitePatterns
EGF-like_CS (IPR013032) - T[25-36] . - T[25-36] .
SUPERFAMILY
CTDL_fold (IPR016187) - T[89-200] 2.53E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value