- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1645747-1662899.15372.t
Possible name(s)
DDX27; DDX46; DDX54
Gene model
Location
R0 [1,645,746 / 1,661,342]
Amino acid sequence
Length: 705
>Cisavi.CG.ENS81.R0.1645747-1662899.15372.p
YTSEAELNTRKLVTQMNRKKKKSGGFQSMGLSHSVFKGVIRKGYKVPTPIQRKCIPLILS
DKDVVAMARTGSGKTAAFLIPMFEKLQVTQSGAGARALLLSPTRELALQTFKFVKELGKY
TSLRTACILGGDSMSEQFSAMHENPDVIIATPGRLMHVLVEMELRLSNMHYVVFDEADRL
FELGFQEHLREILRRLPEDRQTLLFSATLPKQLVEFAKAGLNDPTLVRLDLDSKLSDQLK
LAFLHLREDDKLPILIHLLRNVFKETEQSVVFVPTKHHVEYVKDVLQLLGMSCSYVYSSL
DQTARKINIAKFRNKKTMVLIVTDVAARGLDIPMLDNVVNYSFPAKSKLFVHRVGRVARA
GRTGTAYSLVCQDELAYAIDLHLFLGRPLNFAKSGHTYQVWDNVYGAVSQRVVDEEQATL
ENFRKNSTLQELLKISQNAYKCSKKYTWSQMSQEIFIDLIFNLIACLDSPILSSDKSEEA
RLNLLSSVRQYKPNSTIFEIGATTKSSGAVVMKKTRKRNMKFVELHREKVKKLSEKNEQE
FSKPEINDTDEKPIEEETLKSAFTTIVRPSNKMREFSESKKKKKRRASNFKDNDFYIDYK
PKDYNTEAGIGESRTNFAKEASNLTLDLIGDEDKMLRQQKLQQKVWDRKKKRFVNAQDSS
GLGKKKIRTESGAVISSTYKKNIYQEWKKKTKLNDRNEDSHRSDG
Nucleotide sequence
Length: 2,289
>Cisavi.CG.ENS81.R0.1645747-1662899.15372.t
GAACTGCTTGCTGATGAAAAGTTCGCAGGAAAATTTAACATAAACATGAAAAAAGAAGAC
ATTCCATCGGATAGCGAGGGGGAGGTTGATTTAGATATTGAACCATCCAGTTCCACCACA
AAGAAGGGCGGACAGGGCGACATCAATGAGTTGTTGTCCATCCTGGATGATGGCTACACC
TCTGAGGCGGAACTTAATACGAGGAAACTCGTCACTCAAATGAATCGTAAAAAAAAGAAA
TCTGGAGGTTTCCAGTCAATGGGTTTATCCCATTCAGTATTCAAAGGTGTAATTCGAAAA
GGTTACAAAGTGCCAACACCCATTCAGAGAAAGTGTATACCTCTTATTTTGAGCGATAAA
GATGTGGTAGCAATGGCGCGGACTGGCAGTGGGAAAACTGCTGCGTTTCTTATTCCCATG
TTCGAAAAGTTACAAGTCACCCAAAGTGGAGCAGGTGCAAGGGCATTGCTGCTGTCACCT
ACCAGGGAGCTTGCTCTGCAGACTTTCAAGTTTGTCAAAGAGCTTGGAAAGTACACATCC
CTACGAACGGCTTGTATTTTGGGGGGTGACAGTATGAGCGAGCAGTTTTCTGCGATGCAT
GAAAATCCGGATGTAATTATCGCTACCCCTGGACGACTAATGCATGTGCTCGTGGAAATG
GAACTGCGATTGTCCAATATGCACTACGTGGTGTTTGATGAAGCTGATCGGTTATTTGAG
CTGGGTTTTCAAGAGCATCTTCGTGAAATTTTGCGCCGGTTACCTGAAGATCGTCAGACT
TTGTTATTCTCTGCCACTCTTCCGAAACAACTAGTGGAATTCGCAAAAGCAGGTTTAAAC
GACCCTACACTGGTTAGACTCGATCTCGATTCAAAATTAAGTGATCAACTAAAGTTAGCC
TTCCTCCATTTGCGGGAAGATGACAAACTTCCAATTCTTATTCATCTTCTCCGCAATGTG
TTCAAAGAAACCGAGCAATCAGTCGTCTTTGTACCAACCAAACATCATGTAGAATATGTC
AAGGATGTATTACAACTGCTGGGCATGAGCTGCTCTTACGTTTACAGCAGCCTCGACCAG
ACGGCTCGGAAAATTAACATTGCAAAGTTCCGGAACAAGAAGACAATGGTGTTGATTGTT
ACGGATGTGGCAGCGAGAGGACTTGACATTCCGATGTTGGATAACGTGGTCAATTACTCC
TTTCCTGCCAAATCTAAACTTTTTGTCCACAGAGTGGGCCGGGTAGCGAGAGCGGGTCGT
ACGGGAACTGCTTACTCCCTCGTGTGTCAGGATGAGCTTGCTTACGCCATTGATCTACAT
CTTTTTCTTGGTCGACCGTTAAACTTCGCAAAATCCGGACACACATACCAGGTTTGGGAC
AACGTATACGGGGCAGTGTCGCAGAGAGTGGTGGATGAAGAACAAGCCACTCTGGAAAAC
TTTAGGAAAAACAGCACCTTGCAAGAGCTGCTTAAAATCTCCCAAAATGCGTACAAATGT
TCTAAAAAATATACCTGGTCCCAGATGTCCCAAGAGATTTTTATAGACCTCATTTTTAAT
CTAATAGCTTGCCTTGATTCTCCCATATTAAGTTCTGACAAATCTGAAGAGGCCAGGTTG
AATTTATTGTCAAGTGTTCGTCAATATAAACCAAATTCTACGATTTTTGAAATTGGGGCA
ACCACGAAAAGCTCTGGGGCTGTTGTGATGAAGAAAACGCGGAAACGAAACATGAAGTTT
GTCGAACTGCACCGGGAAAAAGTGAAAAAACTAAGCGAGAAAAATGAACAAGAATTTTCA
AAACCGGAAATTAACGATACCGATGAAAAACCCATTGAAGAAGAAACTTTGAAGAGCGCA
TTTACTACAATAGTGCGACCTAGCAACAAAATGAGAGAATTTTCAGAGTCGAAAAAAAAG
AAAAAAAGAAGAGCTTCAAATTTTAAAGACAACGATTTTTATATTGACTACAAGCCAAAG
GACTATAACACTGAAGCTGGCATAGGGGAAAGTCGAACGAACTTTGCGAAAGAAGCATCC
AATCTTACTCTGGATCTTATTGGAGATGAGGACAAAATGCTTCGGCAGCAAAAATTGCAA
CAAAAGGTTTGGGATAGGAAGAAAAAGCGATTTGTAAATGCCCAGGATTCTTCGGGATTG
GGAAAGAAGAAGATCAGGACCGAAAGTGGAGCAGTCATCTCCTCCACATACAAGAAGAAC
ATCTACCAGGAGTGGAAGAAGAAAACGAAATTGAACGATCGGAATGAAGATTCCCATCGA
AGTGATGGC
| PANTHER |
DDX54/DBP10 (IPR033517) - T[3-642] 6.5E-160 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[24-52] 9.745 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[43-239] 1.4E-58 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[48-213] 1.1E-50 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[55-227] 32.697 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[94-379] 1.44E-66 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[173-181] . |
| CDD |
Helicase_C (IPR001650) - T[248-369] 1.97977E-32 |
| Pfam |
Helicase_C (IPR001650) - T[251-361] 2.4E-22 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[254-406] 17.57 |
| SMART |
Helicase_C (IPR001650) - T[280-361] 1.0E-23 |
| ProDom |
DBP10_C (IPR012541) - T[617-699] 3.0E-14 |
| SMART |
DBP10_C (IPR012541) - T[627-690] 1.6E-26 |
| Pfam |
DBP10_C (IPR012541) - T[627-690] 7.5E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX46_HUMAN | 36.872 % | 247 | 3.49E-70 |
| DDX27_HUMAN | 37.853 % | 256 | 1.5E-74 |
| DDX54_HUMAN | 51.821 % | 696 | 0 |