Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R0.1511259-1520428.15351.t

Possible name(s)

CHDH

Gene model

Cisavi.CG.ENS81.R0.1511259-1520428

Location

R0 [1,511,258 / 1,515,987]

Sequences

Amino acid sequence

Length: 286

>Cisavi.CG.ENS81.R0.1511259-1520428.15351.p
MARVLYLAILAFVAAYIIQYYRVKRCSITRETADNEYDFVIVGAGTSGSVIANRLSEIHN
VKILLLEAGEEDSPNFLINTPMMVTTLQNASTDWSYRTVPQKHACFSLKDQVSFWPRGKV
LGGSSSINYMVYSRGNRYDYDAWEASGAVGWGFDDVLAYFKKAESGHIKGHDNLGTDGPL
NIESSFGNKASEWFIKAGKEIGYKEFDYNAGTGEGFSRIQYSRKNGVRQSSSSGYLHQVA
KQRSNLHILSGAHVQRILFDQKDEVPRAIGVEYIKNGQKFEVMASK

Nucleotide sequence

Length: 934

>Cisavi.CG.ENS81.R0.1511259-1520428.15351.t
GAACCATGGTTATGGGATTTACCCTGTATTTTTATTCATTCTAACATTTTATTTTACTGA
TTATTCAAAACACCATGGCACGCGTATTGTATCTAGCAATTTTAGCTTTCGTAGCAGCTT
ATATAATCCAATATTATCGAGTGAAGCGTTGTTCTATAACCAGGGAAACAGCTGATAATG
AATATGATTTTGTAATTGTTGGAGCTGGAACTTCTGGAAGTGTGATTGCGAATCGCCTTA
GTGAAATACACAATGTAAAAATTCTTTTACTGGAAGCTGGAGAAGAAGATTCTCCAAACT
TCCTGATCAACACTCCAATGATGGTGACTACCTTGCAAAATGCAAGCACAGATTGGTCGT
ACCGCACTGTCCCACAAAAACATGCCTGCTTTAGCTTGAAAGATCAGGTAAGCTTCTGGC
CCCGAGGTAAAGTTCTTGGTGGCTCAAGTTCCATCAACTACATGGTGTATTCTCGTGGAA
ATCGCTATGATTACGATGCATGGGAAGCTTCTGGGGCTGTTGGTTGGGGTTTTGATGATG
TTTTAGCTTATTTTAAGAAAGCTGAAAGCGGACATATAAAAGGTCATGACAATCTTGGAA
CTGATGGACCTCTTAACATTGAATCCAGTTTTGGTAACAAAGCTTCTGAATGGTTCATAA
AAGCAGGAAAAGAAATTGGTTACAAAGAGTTCGACTACAATGCTGGTACAGGAGAAGGCT
TCTCACGTATTCAGTACTCAAGAAAAAATGGAGTGCGACAAAGTTCTTCCTCAGGATATC
TTCACCAAGTTGCAAAACAAAGATCTAACCTTCACATTTTGAGTGGAGCTCATGTCCAGC
GAATTTTATTTGACCAAAAAGATGAAGTTCCTAGAGCAATTGGGGTGGAGTACATCAAGA
ATGGTCAGAAGTTTGAAGTGATGGCATCAAAAGA

InterProScan

SUPERFAMILY	FAD/NAD-bd_sf (IPR036188) - T[31-286] 5.18E-43
Gene3D	FAD/NAD-bd_sf (IPR036188) - T[37-75] 6.3E-79 - T[117-166] 6.3E-79 - T[231-286] 6.3E-79
Pfam	GMC_OxRdtase_N (IPR000172) - T[37-279] 2.2E-54
ProSitePatterns	GMC_OxRdtase_N (IPR000172) - T[118-141] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CHDH_HUMAN	38.697 %	162	5.56E-46