- Transcript 'Cisavi.CG.ENS81.R0.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R0.1335989-1351198.15034.t
Possible name(s)
CHERP; SF3A1; SFSWAP
Gene model
Location
R0 [1,344,184 / 1,351,198]
Amino acid sequence
Length: 335
>Cisavi.CG.ENS81.R0.1335989-1351198.15034.p
MEIPATEKMNAIIEKTAKFVSQQGAQMEIVLKAKQSNNSQFQFLQFGHYLNPYYKHMVTK
IKEGKYNPEAEENKNKSEDEESDSDSDDGGGYLHPSLFASSHKVRQAENIEKTKAIRTVD
PDHPLAQLIAKGRAANAAKQYQKMAETMKDYYKNNSTNGSNTDDTNTTLPPFMSMSSHST
AVVNPAPNSISGTDPNTTHAPGYIGTGVHIVPPPPDMQPIVENIARRVAIEGGGIEATIF
TQNPVTFCFLNPSNELYPYYHYRKLAWVKHLYPPPTVETNAGEVVENGEENEQAEDELSA
PGPISFSIKPRSEVAKQPLVTSQTTLLLGGNESEE
Nucleotide sequence
Length: 1,053
>Cisavi.CG.ENS81.R0.1335989-1351198.15034.t
GATGAAAAACCATTTACCGCGCCTTCATCACTAGATGTCCCTGAAGAGATGGAAATTCCT
GCTACAGAGAAAATGAATGCAATCATCGAAAAGACGGCAAAATTTGTGAGCCAGCAAGGA
GCACAGATGGAAATAGTGTTGAAGGCGAAACAATCCAACAACTCACAGTTTCAATTCCTG
CAGTTCGGCCACTACCTCAACCCATATTACAAACATATGGTCACCAAAATAAAAGAAGGC
AAATACAACCCAGAAGCAGAAGAAAACAAAAACAAGTCGGAAGATGAGGAGTCTGACAGC
GACAGTGATGATGGTGGAGGTTATCTTCATCCAAGTTTATTCGCATCTTCCCACAAAGTA
AGACAAGCAGAGAATATTGAGAAAACCAAGGCAATTCGGACTGTAGACCCAGATCACCCT
CTTGCTCAGCTGATAGCAAAAGGCCGAGCTGCAAATGCCGCAAAGCAGTACCAGAAGATG
GCGGAAACTATGAAAGATTATTATAAGAACAATTCAACCAATGGTTCAAACACTGATGAT
ACCAACACCACACTGCCCCCATTCATGTCCATGAGTTCTCATTCCACTGCAGTTGTCAAC
CCCGCCCCGAATTCCATCAGTGGGACAGATCCCAACACCACCCATGCACCGGGGTATATT
GGTACCGGGGTCCATATTGTACCCCCACCCCCTGACATGCAACCGATCGTAGAAAATATT
GCAAGGAGGGTAGCTATCGAAGGTGGTGGAATAGAAGCTACGATTTTCACCCAAAACCCA
GTCACATTTTGTTTTCTAAATCCGTCTAATGAGCTTTACCCCTACTACCACTATCGTAAA
CTTGCATGGGTGAAACACCTCTACCCACCACCTACTGTGGAGACCAATGCAGGTGAAGTT
GTGGAAAATGGTGAAGAAAATGAACAAGCTGAAGATGAGCTTTCTGCCCCCGGCCCCATA
TCCTTCTCCATAAAACCTCGAAGTGAGGTAGCTAAACAGCCGCTTGTGACATCACAAACG
ACATTGCTCCTTGGAGGAAATGAGAGTGAAGAG
| SUPERFAMILY |
SWAP/Surp_sf (IPR035967) - T[3-62] 3.01E-19 - T[204-266] 8.76E-11 |
| Gene3D |
SWAP/Surp_sf (IPR035967) - T[5-63] 2.3E-25 - T[215-270] 1.4E-10 |
| SMART |
Surp (IPR000061) - T[10-63] 1.2E-16 - T[218-269] 0.066 |
| Pfam |
Surp (IPR000061) - T[12-59] 2.6E-15 |
| ProSiteProfiles |
Surp (IPR000061) - T[12-54] 15.643 - T[220-260] 10.446 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SFSWA_HUMAN | 51.408 % | 134 | 5.71E-35 |