- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C11.549.v1...' >
- Transcript 'Boleac.CG.SB_v3.S22....' >
- Transcript 'KH2012:KH.C11.83.v1....' >
- Transcript 'Boleac.CG.SB_v3.S257...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S257.g06124.01.t
Possible name(s)
WDR45; WDR45B; WIPI2
Gene model
Location
S257 [7,150 / 9,749]
Amino acid sequence
Length: 346
>Boleac.CG.SB_v3.S257.g06124.01.p
MKMDYTVNGVEFNQDKSCFSCAMSNGIRVYNVDPLTEKCRLEFDTVGSVAKVVMLHRTNL
XAVLSGGKHPKLPSNSVAIWDDRRKGFVXDYTFDDTVLNVRMRKDKLIAVLPHKVYVFSF
PNDSSKIFEVRTTINTLGICELCTSNDKQIMATLGHKTGSIQLIDLSVTXKGASASPVNI
NAHNGHIACXALNHSGTLVATASNKGTLIRLFDVPSRQPLVELRRGTDQATLYCINFSSD
SSFLCVSSDKGTVHVFALKDTNLNRRSAFAKAGKVGLNNRYTDSQWSLANFTVPAECACV
CAFAGFNSVVAVCLDGTFHKYVFTPEGACSREAYDVYLDVGDEADF
Nucleotide sequence
Length: 1,709
>Boleac.CG.SB_v3.S257.g06124.01.t
TCAGAGCTGTAGTGATTGTTTCGTTTATGTGGCCGTATAAGACGTATTATCTTTTGAATT
AATGAAGATGGACTACACTGTGAACGGAGTTGAATTCAATCAAGATAAATCATGCTTCAG
TTGTGCAATGAGTAACGGAATCAGGGTCTATAATGTTGACCCATTAACAGAGAAATGCAG
ATTAGAATTCGACACCGTTGGAAGCGTTGCAAAGGTTGTCATGCTTCATCGAACAAATCT
ANTGGCTGTGTTAAGCGGAGGAAAGCACCCAAAATTACCATCAAATTCTGTTGCCATATG
GGATGACAGACGNAAAGGCTTTGTTTTNGACTATACATTTGATGACACTGTTCTNAATGT
GCGAATGCGAAAAGACAAACTNATAGCCGTGCTTCCACACAAAGTTTATGTCTTCAGCTT
TCCCAATGATTCAAGCAAGATTTTTGAAGTNAGAACTACAATAAACACATTGGGAATTTG
TGAATTGTGCACAAGCAATGACAAACAAATCATGGCTACTTTAGGTCACAAAACAGGATC
AATTCAATTGATTGACCTATCTGTAACAGANAAAGGTGCTTCAGCNTCNCCAGTAAACAT
AAATGCACATAACGGTCATATAGCNTGTATNGCACTTAACCATTCAGGCACTTTGGTCGC
AACTGCTTCAAATAAAGGGACTTTGATTCGATTGTTCGATGTACCGTCAAGACAACCTTT
GGTTGAACTCCGTCGTGGTACAGATCAGGCTACCTTGTATTGTATAAACTTTAGCAGTGA
TTCCTCTTTTTTGTGTGTATCTAGTGATAAAGGCACTGTTCATGTATTTGCCCTGAAAGA
CACGAATCTTAACAGACGATCTGCCTTTGCTAAGGCTGGTAAAGTCGGCTTGAATAATCG
CTATACTGATTCGCAATGGAGTTTGGCAAATTTCACTGTACCAGCAGAATGTGCTTGCGT
GTGTGCATTTGCAGGATTTAACTCTGTTGTTGCTGTGTGCCTTGATGGTACGTTTCATAA
ATATGTTTTCACACCTGAAGGCGCTTGTAGTCGGGAGGCGTATGATGTTTACTTGGACGT
NGGCGACGAAGCGGATTTTTAAGCATGTTTTAGCTGGTTGGCTATTTATGTTGTTACTGT
GTCATGTGCTGAAATGAAATGCCTAATCTACTGTGGCCAGAGTTCTGCTTTAATTCGGGA
ATATCCTGCTCTTACATGGAGATGTCTCGAACTTTTGGTTGAGTGTCCCGGTTGTTGCGT
AGACGAAAATGACCTAACTTTTGAAAAAATGTCCCCTTTGCTACGATTTTGTTGCGTCAA
GCATCTCGTTCTGCCCCGCTCCAGCGTCGTAGGCGTTCCAATATGTCCCGTTTATATTGA
AAAAATTGGACTAACAATTTCATGTAAAATGTCGCCACTGTTTGCGAACGAAAACATGTA
TCTCTCGTCTCAAAATGCTCTCTTTGAACATGTATCAGCGTTCCCATATCTATTTTCTAA
GAATTCTGGTCACGTTACCCAAATGTGTGATCGTACTTGTTTCAAGTAAATATTTTCCTA
TTCATTACTTGAGCCTTGAACAAATGCTTGGTGTGATCGCGCTTAGGTCAAGTTTTCTAG
GCTTGCAAGTATTTTATGATGTGGTGTGTTATGTGAGTCTGTCTCAAACCTTAACGCTGT
AACGAATTATACTATGATATCGACGCAAT
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[2-274] 1.7E-20 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[6-319] 6.87E-29 |
| PANTHER |
WIPI4 (IPR032910) - T[6-346] 1.9E-142 |
| SMART |
WD40_repeat (IPR001680) - T[174-213] 0.73 - T[216-257] 0.7 |
| Pfam |
WD40_repeat (IPR001680) - T[226-256] 0.042 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WIPI3_HUMAN | 44.745 % | 303 | 9.09E-102 |
| WIPI4_HUMAN | 59.375 % | 435 | 1.37E-153 |
| WIPI2_HUMAN | 35.429 % | 102 | 3.01E-24 |