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- Transcript 'Boleac.CG.SB_v3.S256...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S256.g06110.01.t
Possible name(s)
TBX2; TBX5; TBX6
Gene model
Location
S256 [79,906 / 85,120]
Amino acid sequence
Length: 450
>Boleac.CG.SB_v3.S256.g06110.01.p
MFSQPEVAPVSSLLPNNEQAELRQQYGAMATEGPRHGASLNETRIGYDQQGVLRLESLKI
GDAEKTRNNLIHYLPTVPNAQSRSPYDFQDSLHSSVVQVRLEQVELWQEFYHVGTEMILT
KSGRRMFPGCRIQLSGLQSDSYYCVFMSVERVDGNRYRYQNGHWVSAGPGEVEFPKRYFV
HQDSPTTGAKWMESEVSFHKVKLTNSNASSNHTNGKLTKLKIANNPFAKGFRDDGARCGK
SPRTTSPLRETPSSRPYQNEPVYHPQKQRIISFIQVSKTEPSKNPLKKKDNCHYLCLYVN
AGRPYEPSLARYIRSPNDEEGFEQRRLWGLMELHKVDGKQSSRSGKFELWFDSPYKFEAK
TSQEKEKFVEDIADTLKKFTTGAPPEFVDVNNISNQAVTKIANERSQLEKTKEELEERGQ
KLSDVEQKTAEMACSAESFAETAQKLAGQH
Nucleotide sequence
Length: 1,353
>Boleac.CG.SB_v3.S256.g06110.01.t
ATGTTCTCGCAGCCTGAAGTTGCACCTGTAAGTTCTCTCTTGCCAAATAATGAGCAGGCG
GAGTTGCGACAGCAGTATGGAGCAATGGCCACCGAAGGCCCCCGTCATGGAGCAAGTCTA
AATGAAACGAGGATTGGTTACGATCAGCAAGGCGTTCTAAGATTGGAGTCGCTGAAAATA
GGTGACGCTGAAAAGACAAGAAATAATTTAATCCATTATCTCCCCACGGTACCAAATGCT
CAATCTCGATCACCATATGATTTTCAAGACAGTCTCCATTCATCGGTGGTTCAAGTTAGA
TTGGAACAAGTTGAGTTGTGGCAAGAATTCTACCATGTAGGAACTGAAATGATACTAACG
AAATCCGGCAGACGAATGTTTCCAGGATGCAGGATCCAACTGTCTGGGTTGCAATCTGAC
TCCTACTATTGCGTGTTCATGAGCGTGGAAAGAGTGGATGGAAACAGATATCGATATCAG
AACGGCCACTGGGTTTCAGCGGGGCCAGGGGAAGTAGAATTTCCGAAGCGATACTTTGTG
CACCAAGACTCTCCTACGACTGGAGCGAAATGGATGGAGTCGGAAGTATCTTTTCATAAA
GTAAAGCTCACGAATTCAAACGCTAGCTCTAATCACACCAACGGAAAGCTTACTAAACTA
AAAATCGCCAACAATCCATTTGCAAAAGGCTTTCGTGATGACGGCGCAAGATGTGGAAAA
AGCCCCAGAACGACATCACCACTCCGTGAAACACCATCCTCACGACCTTACCAAAACGAG
CCAGTGTATCATCCTCAAAAGCAGCGGATAATCAGTTTCATTCAAGTGTCAAAAACGGAG
CCCAGTAAAAATCCTTTGAAGAAAAAAGACAACTGTCATTACTTGTGTTTGTATGTAAAT
GCTGGTAGACCTTACGAGCCATCATTAGCACGCTATATTAGGTCCCCAAATGACGAAGAA
GGTTTCGAGCAGCGAAGACTCTGGGGTTTGATGGAGTTACATAAGGTAGATGGCAAGCAA
TCTAGTCGTTCTGGTAAATTTGAGCTTTGGTTCGATTCACCATACAAATTTGAAGCCAAA
ACTAGCCAGGAAAAAGAGAAATTTGTGGAAGATATTGCCGATACTCTTAAAAAGTTCACC
ACTGGAGCACCTCCGGAGTTTGTTGATGTCAATAATATAAGCAATCAGGCTGTTACAAAG
ATTGCCAACGAGAGATCACAACTTGAGAAAACAAAGGAAGAATTAGAGGAACGTGGACAG
AAACTCAGTGATGTTGAACAGAAGACAGCAGAAATGGCCTGCAGTGCAGAGTCATTTGCT
GAAACTGCTCAAAAGCTTGCTGGTCAACATTAA
| PANTHER |
TF_T-box (IPR001699) - T[80-208] 3.3E-60 - T[214-258] 3.3E-60 |
| Gene3D |
T-box_sf (IPR036960) - T[86-217] 3.7E-46 |
| SMART |
TF_T-box (IPR001699) - T[96-238] 4.0E-58 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[97-235] 1.74E-44 |
| Pfam |
TF_T-box (IPR001699) - T[99-211] 6.2E-40 - T[212-233] 1.1E-4 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[101-220] 38.721 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[106-125] . |
| PRINTS |
TF_T-box (IPR001699) - T[114-138] 5.2E-20 - T[179-192] 5.2E-20 - T[196-205] 5.2E-20 |
| SMART |
Sec3-PIP2_bind (IPR028258) - T[288-379] 1.3E-9 |
| Pfam |
Sec3-PIP2_bind (IPR028258) - T[292-376] 5.5E-12 |
| ProSiteProfiles |
Synaptobrevin (IPR001388) - T[393-450] 9.341 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 39.796 % | 150 | 1.3E-40 |
| TBX2_HUMAN | 38.919 % | 143 | 5.93E-37 |
| TBX5_HUMAN | 35.87 % | 127 | 3.8E-32 |