- Transcript 'Boleac.CG.SB_v3.S256...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S256.g06109.01.t
Possible name(s)
TBX2; TBX3; TBX6
Gene model
Location
S256 [72,548 / 75,702]
Amino acid sequence
Length: 362
>Boleac.CG.SB_v3.S256.g06109.01.p
MASYPSADLPDSWASSSSSHRDVGCSLFQSGMNADSTSEGVPLQYKGFSCVESATLSQQR
RHFPNTTPVFGTYVPNAAENGMDPYVSKFSQMTHWQMNSIPHSTAKPEGDNNYMQFYDSA
LRNSYQLPDSSVPDPQMQVQLCDKELWEQFSRAGTEMIVTKTGRRMFPGYRIKISGLDKD
AYYCVMMDIVNVDDHRYKFQHGEWTIAGRGEPHLPQRFFLHPDSPANGAKWMSEVVSFHK
VKLTNSVGRDVDGKIVLNSMHRYQPRIHIVRTNDTSTVHLQRLCTFAFPQTVFITVTAYQ
NPEVTKLKIDNNPFAKGFREDGARAKKPRSDESFDHFTGMNLTSQAQYGYAASRFPHTPV
VT
Nucleotide sequence
Length: 1,086
>Boleac.CG.SB_v3.S256.g06109.01.t
ATGGCTTCATACCCATCAGCGGACTTGCCTGACTCATGGGCTTCATCATCATCATCGCAT
CGAGATGTTGGATGTTCACTGTTTCAAAGTGGGATGAACGCGGATAGTACCAGTGAAGGA
GTACCGTTGCAGTATAAAGGATTCTCATGTGTGGAATCGGCTACATTGTCGCAGCAGAGA
CGCCATTTTCCAAACACCACCCCGGTTTTCGGTACTTATGTTCCGAACGCGGCGGAGAAT
GGTATGGATCCTTACGTATCAAAGTTTTCTCAAATGACGCACTGGCAGATGAACAGTATA
CCACACAGTACGGCAAAACCAGAAGGAGACAATAATTACATGCAATTTTACGACTCCGCC
CTTAGGAACAGCTACCAATTACCCGATTCCAGTGTACCGGATCCGCAAATGCAGGTTCAA
CTATGCGATAAAGAACTTTGGGAACAATTCTCTCGAGCTGGAACGGAAATGATTGTTACA
AAGACAGGAAGACGCATGTTTCCTGGTTACCGAATTAAGATCTCAGGATTGGACAAAGAT
GCTTATTACTGCGTTATGATGGATATTGTCAACGTCGATGACCATAGATACAAATTTCAG
CATGGAGAATGGACGATAGCAGGACGAGGAGAGCCACATTTACCGCAGCGGTTTTTTCTA
CATCCTGATTCCCCAGCCAACGGCGCTAAATGGATGAGCGAAGTCGTGTCTTTTCACAAA
GTGAAATTGACAAACTCTGTCGGCAGGGATGTGGATGGTAAGATCGTCTTGAATTCAATG
CATCGGTACCAACCGAGAATACACATCGTCAGGACCAATGATACATCTACAGTACATCTG
CAAAGACTGTGCACTTTCGCGTTTCCTCAAACAGTATTCATTACAGTTACTGCATATCAA
AACCCAGAGGTGACTAAATTAAAAATTGACAACAACCCATTCGCGAAGGGATTCCGAGAA
GACGGCGCCAGGGCGAAGAAACCACGTTCTGATGAAAGTTTTGATCATTTCACGGGAATG
AACTTGACTAGTCAAGCTCAATACGGATACGCAGCCTCGCGATTTCCTCATACTCCAGTA
GTAACA
| PANTHER |
TF_T-box (IPR001699) - T[97-333] 6.9E-117 |
| Gene3D |
T-box_sf (IPR036960) - T[134-326] 1.4E-85 |
| SMART |
TF_T-box (IPR001699) - T[136-325] 7.1E-118 |
| CDD |
TF_T-box (IPR001699) - T[136-324] 1.9494E-119 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[137-320] 4.85E-75 |
| Pfam |
TF_T-box (IPR001699) - T[139-320] 8.2E-78 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[141-320] 74.947 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[146-165] . - T[220-238] . |
| PRINTS |
TF_T-box (IPR001699) - T[154-178] 2.7E-43 - T[219-232] 2.7E-43 - T[236-245] 2.7E-43 - T[256-270] 2.7E-43 - T[291-304] 2.7E-43 - T[312-320] 2.7E-43 |
| PRINTS |
TF_Brachyury (IPR002070) - T[199-219] 7.4E-5 - T[261-278] 7.4E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 49.302 % | 237 | 1.26E-74 |
| TBX2_HUMAN | 56.216 % | 242 | 5.17E-74 |
| TBX3_HUMAN | 51.22 % | 234 | 7.83E-71 |