- Molecular Tool 'Lhx3-E2I3 (Christiaen 2009)' >
- Transcript 'Moocci.CG.ELv1_2.S44...' >
- Molecular Tool 'Coe>Vsx (Stolfi 2011)' >
- Region 'REG00000366' >
- Transcript 'Boleac.CG.SB_v3.S251...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S251.g06023.01.t
Possible name(s)
DDX58; FANCM; IFIH1
Gene model
Location
S251 [66,112 / 87,119]
Amino acid sequence
Length: 2,151
>Boleac.CG.SB_v3.S251.g06023.01.p
LWRLPAAALSGVRSNSTIKMSKHGSSKQKTLFQAWEGKVAVKPKSQPVQREKKRLFNAQK
AAKMCTVVDLTNDLDDDDLLEAVEVMESSMIEEQEQPGKSEAIETIPGFDNDLGSMWIYP
TNYPIRDYQYAIVKSALFKNTLVSLPTGLGKTFIAAVVMYNFYRWYPQGKVVFMAPTKPL
VSQQIEACYKIMGIPYDDQAEITGITTAVHKREELWRTKRVFFLTPQVINNDLARGVCPA
NDIKCIVIDEAHKAQGKHAYCQVINQLAACSRMFRVLALSATPGTDVKSVQQVXXAYXND
LFISRYKPFVSLNVINNLLISHIEIRSEESLDIRGYSHHRKIEKVVCKLGEKMVAMTNNY
LQVIELFTNSLVNKNALYQRDTASYSKYGILLSREQFRKNPPSGLSKYELGTIEGDFATC
ISLFHGFXLLQQHGMRSFYIFLKAMMEGEKGNLRAKTVLXANQTFREMFASLVQMFGHSP
NPNVAFTQAGSTSNMPSRPEVSGEYVYSHPKIRKLEKVVLDHFANFAKDESSRETRVMVF
CQYRDTVQEITELLQKHRPMVRPMQFVGHSXASGKIAKFTQKDQLKVVSKFRSGGYNTLI
STCVGEEGLDIGDVDLIVCFDAHKSPIRLVQRMGRTGRKREGRIVMLVTEGKEERDYNSS
VSNRKSIQKAITGNSSRSLHFYANNPRMVPRGLHPQPLKMAMTVKAKPSAVSAPKKKKTK
SNNMDISLIIKNEEMKNPIYLTADQVKEWDEKFKLSSNEKNQAKSFPAFGRMECLRDGSS
AHQKGELCFAEWNLWQVRLQETSNIGHSSITKNFVEIMNLCDHMKQSEIIECDKNPQDKG
DSLSTVVKHKSPSKKQKRAVVSKQSNLDNFIVESPCNEDDTLVGIESIIDEEVHDHTNDE
KVPVEITPTSSPQKQCAKQTQKAELKILPVHTPKKIPAQNTTKVDPLLDFINDLSDSSGD
EQPPPKQTNSEFSDQDTDDEEEEGNDIDCEISDRSQAPHTKFPHPSPPTVDLLDNSFDDA
QNFDAEDGQNFTQSFDLNFDDDEEDLFCNPQFDSTIKRKSMVETAEKSNNKAKMKNHQTH
APQHDEFVSGFRTMAGNEKVANATRTSPIDAVTKSCLSGNGCDPETFSHNLNKTGEDQKI
DGCRKPVKILVHRKGDFSRNFKVENMDMCTDVVGLGDMTKNSKLHKTDIDDLSKEEEENI
SSLRRFSEIIPQTNDFDENIQDKDSEDIFSNSPNSGIPNFDLNASMDMFSPNFDLGFDIE
PTNSAKFGKNTKANIEQSPILNKACKVKKEKQIEENSPGHITMTQKVENRALFADLGKSY
DTSKTKIAQVKPQVKFKKSSVSDSIPTPTLPVLEQDMEEPPFLSMRHKRSLDNNSEHVMT
KRKKDAPKTPVNSKGALNIDEDSETTEESPLFVSKKQKPQSKKLEFSPESDKSKYSPDRD
KLVKKAASFGNFDETPVSRKRRSDDGKRISFPDNARKHSTPKALVAEDELSDEDFKGADH
KRLKAKPCPPKKLLSKVVKDDFVDFEAEVSQDGVPISTDEEDDSEADPAVLEEMKNFVND
ASVLTQHVGNGPAVDEHAMYLCGNADFFDEGGQFGNNKAKFKLAFNIRSDVDVFSQEPAD
HESDYEQDSFVCDDEVQHDSTDFGEITLLDRIDSPILAGKLTRRQVELNRLKKFNKDSSA
VTEKKNQTSKKAAPRKRIICFDDSTESTESVKSPDNFHKKIPENETGWTCPACTLLNKPS
CMTCELCDCEKPSPQVASQPAWTCKSCTYINGGQNDVCIMCGKLRMHQKSKQKARKSDER
QQPCTSRDESFTNIRLTDADRHKVLSGRADKSTNMQDTSCSASASRLVGTPTGNLEIEER
LKRVMKKRLDFKAKRESLGAHHQVKVPMKSVGQDRDKSTSDAKPSAQDVINSSVVSPAKK
SDTVSGPIVVLVDSKELSSSQPIITMLRSKFEANVTVASLPHCDYIIGIGTAVTRLMLSE
VSQVSSKQKLSTKFQQLNVHYDRVYAIIEQDSVKKGDWSRRIIRSTHFMSMMCCLAQCNI
RVLYSDNQDETAGILKMLAARERDLKRAISVDAAAKANDSNSRLLLKLFLNMPKVSFVSA
LYMCLHFKTFKEAASSSVEKLIQKAHLSTYAAAEVYTFCRRKFDIQMTPTR
Nucleotide sequence
Length: 6,506
>Boleac.CG.SB_v3.S251.g06023.01.t
TTGTGGCGGCTGCCTGCTGCTGCATTGAGTGGTGTCCGTTCAAACAGCACAATAAAGATG
TCCAAGCATGGCAGTTCTAAGCAGAAGACGTTGTTTCAAGCGTGGGAAGGGAAAGTAGCG
GTCAAACCGAAGAGTCAACCAGTGCAGCGTGAAAAGAAAAGGCTCTTCAATGCTCAAAAA
GCTGCCAAAATGTGTACAGTTGTAGATCTTACCAATGACTTGGACGATGATGACCTACTG
GAAGCCGTGGAAGTAATGGAGTCGTCGATGATTGAGGAACAAGAACAACCGGGAAAATCT
GAAGCGATTGAAACTATCCCTGGATTCGACAATGATCTTGGAAGCATGTGGATTTACCCG
ACAAATTACCCGATTCGTGATTATCAGTATGCTATAGTAAAGAGTGCTCTTTTCAAAAAT
ACATTGGTATCACTACCAACAGGTTTAGGCAAAACCTTTATTGCTGCAGTGGTGATGTAC
AATTTTTACAGATGGTATCCTCAGGGTAAAGTTGTGTTTATGGCTCCTACAAAGCCTTTG
GTATCTCAACAGATTGAAGCCTGTTACAAAATAATGGGTATTCCGTATGATGATCAAGCT
GAAATAACTGGGATTACAACAGCCGTTCACAAACGAGAGGAGTTATGGCGGACAAAGCGT
GTGTTCTTTTTAACCCCACAGGTCATCAATAACGATTTAGCCAGAGGAGTTTGCCCTGCT
AATGATATCAAATGCATAGTTATTGATGAGGCGCACAAAGCTCAGGGGAAACATGCCTAT
TGTCAGGTCATTAATCAACTTGCTGCATGCTCTAGAATGTTCAGAGTGTTGGCTCTCAGC
GCTACTCCGGGTACAGATGTGAAGTCCGTTCAACAGGTAANTTGNGCTTATNTCAATGAT
TTATTCATTAGCAGATACAAGCCGTTTGTTTCTTTGAATGTTATCAACAATTTGCTTATT
TCGCACATTGAGATACGATCGGAAGAGTCACTTGATATCCGAGGATACTCGCACCATCGC
AAGATTGAAAAGGTCGTCTGTAAACTTGGCGAAAAAATGGTTGCTATGACAAACAATTAT
CTTCAGGTTATCGAGCTATTTACGAACAGCCTTGTCAACAAAAACGCATTATATCAACGA
GATACGGCAAGTTATTCAAAATATGGAATTTTACTCTCCAGAGAACAGTTCCGCAAGAAC
CCTCCAAGTGGATTAAGTAAATATGAATTGGGAACTATTGAAGGAGATTTTGCAACATGC
ATTAGCCTATTTCATGGCTTTGANCTNCTGCAACAGCATGGAATGCGGTCGTTTTATATA
TTCCTAAAAGCGATGATGGAAGGAGAGAAAGGTAATTTACGTGCAAAAACTGTTCTGAAN
GCGAATCAGACGTTCCGAGAAATGTTTGCTAGCTTGGTACAGATGTTTGGTCACTCACCT
AATCCAAATGTTGCTTTTACTCAAGCAGGATCGACCTCGAATATGCCCTCGCGTCCAGAA
GTTTCTGGAGAATATGTATACAGTCACCCTAAAATTAGGAAGTTGGAAAAGGTGGTGCTT
GATCATTTTGCAAACTTTGCTAAAGATGAGTCTTCCAGAGAAACAAGAGTGATGGTGTTT
TGTCAATATCGGGATACGGTACAAGAAATTACAGAGCTGCTTCAAAAGCACCGACCAATG
GTCAGGCCGATGCAGTTTGTGGGGCATTCNAANGCATCNGGAAAGATTGCAAAATTCACT
CAAAAGGATCAACTTAAGGTTGTGTCAAAATTTCGTTCTGGTGGCTACAACACTTTGATT
TCAACTTGTGTTGGAGAAGAGGGTTTGGACATTGGTGACGTTGATCTGATTGTTTGTTTT
GACGCACACAAAAGCCCAATTCGACTTGTGCAACGTATGGGACGCACAGGCAGGAAAAGA
GAAGGAAGAATTGTGATGCTTGTGACGGAAGGCAAAGAAGAAAGGGATTACAATTCGAGT
GTTTCGAATCGTAAAAGTATACAGAAAGCCATTACTGGAAACTCATCGAGATCTTTGCAT
TTTTATGCCAACAACCCAAGAATGGTGCCTCGTGGTCTTCATCCACAGCCATTGAAAATG
GCAATGACTGTCAAGGCTAAACCAAGTGCTGTATCGGCACCAAAGAAAAAGAAAACAAAG
TCAAACAACATGGACATCTCCCTCATTATAAAAAATGAGGAAATGAAGAATCCGATTTAT
TTAACGGCAGACCAGGTGAAGGAATGGGATGAGAAATTCAAACTTTCTTCGAATGAAAAA
AATCAAGCAAAATCATTTCCTGCTTTTGGAAGAATGGAATGCCTCAGAGACGGGTCATCT
GCACATCAGAAGGGAGAATTGTGTTTTGCTGAATGGAATTTATGGCAAGTTCGCTTACAA
GAAACAAGTAACATTGGACATTCATCAATTACCAAAAATTTTGTCGAGATAATGAACCTT
TGTGATCACATGAAGCAGTCAGAGATTATTGAATGTGATAAAAATCCACAAGACAAGGGG
GATTCCCTTTCTACAGTAGTGAAACATAAGAGTCCATCTAAAAAACAAAAACGTGCAGTA
GTCTCAAAGCAGTCAAATTTAGATAATTTCATTGTCGAGTCACCTTGCAATGAAGACGAC
ACTCTTGTCGGTATTGAATCTATAATCGATGAAGAAGTCCACGATCATACTAATGATGAG
AAAGTGCCTGTTGAAATAACCCCAACGTCTAGTCCACAAAAACAGTGTGCAAAACAGACT
CAGAAAGCAGAATTGAAAATTTTGCCTGTTCACACACCAAAAAAGATACCAGCTCAAAAT
ACAACCAAGGTTGACCCACTTTTGGATTTCATTAATGATTTATCAGACAGCTCAGGTGAC
GAGCAACCACCTCCGAAACAGACCAATTCTGAGTTTTCTGATCAAGATACTGATGATGAG
GAGGAGGAAGGCAATGATATTGATTGTGAAATTTCAGATCGATCCCAAGCACCACATACA
AAATTTCCTCATCCTAGTCCTCCAACGGTAGATTTACTCGATAATTCTTTTGATGATGCG
CAGAATTTTGATGCTGAAGATGGTCAGAATTTTACTCAATCATTTGATTTGAATTTTGAT
GATGATGAAGAGGATTTATTCTGTAATCCACAGTTTGATAGTACTATAAAGAGGAAAAGT
ATGGTGGAAACGGCGGAAAAGTCAAATAACAAGGCAAAGATGAAAAATCATCAGACGCAT
GCACCTCAACATGATGAATTTGTGAGTGGTTTTAGAACAATGGCAGGCAATGAAAAAGTT
GCAAATGCTACACGCACTTCTCCAATTGATGCGGTTACAAAATCCTGTCTTTCTGGTAAT
GGCTGTGACCCTGAAACATTTTCTCACAACCTTAACAAAACTGGTGAAGATCAAAAGATT
GATGGTTGTAGAAAACCAGTCAAAATCCTTGTACATCGTAAGGGTGACTTTTCTCGCAAT
TTCAAAGTGGAAAATATGGACATGTGTACTGATGTTGTGGGATTAGGTGACATGACAAAA
AATTCCAAATTACACAAAACCGATATTGACGATTTGTCAAAAGAAGAGGAAGAAAATATC
TCAAGTCTACGCCGTTTTTCGGAGATTATTCCGCAAACAAATGATTTTGATGAAAATATT
CAAGATAAAGATAGCGAAGACATATTCTCCAATTCACCAAATAGCGGTATTCCAAATTTT
GATTTGAATGCTTCAATGGACATGTTTTCACCCAATTTTGATCTAGGATTTGATATTGAA
CCCACAAATTCAGCTAAATTTGGCAAAAATACAAAGGCTAATATTGAACAAAGTCCCATT
TTAAACAAGGCATGTAAAGTGAAGAAAGAAAAACAAATTGAAGAAAACTCCCCTGGACAT
ATCACCATGACACAAAAGGTAGAAAATCGTGCGCTTTTTGCTGATTTAGGCAAATCATAT
GACACTTCTAAAACTAAAATTGCCCAAGTTAAACCTCAGGTGAAATTTAAAAAATCTTCC
GTATCGGATTCAATTCCCACGCCGACATTGCCTGTTCTTGAACAAGACATGGAGGAGCCG
CCTTTTCTTTCCATGAGGCATAAGCGTTCGTTGGACAATAATTCAGAGCATGTTATGACT
AAGCGAAAAAAGGACGCTCCGAAGACTCCTGTGAACAGCAAGGGCGCTTTGAACATTGAT
GAAGACAGTGAAACTACTGAAGAGTCACCGTTGTTCGTGTCAAAAAAGCAAAAACCACAA
AGTAAGAAGTTGGAATTTTCACCAGAAAGTGACAAATCCAAATACAGTCCAGACAGAGAC
AAATTAGTAAAGAAGGCGGCTTCATTTGGAAATTTTGATGAAACACCAGTTAGTAGAAAG
CGCCGATCTGATGATGGGAAACGAATCAGTTTCCCTGATAACGCGAGGAAACACAGCACA
CCAAAAGCTCTTGTTGCAGAAGATGAGCTTTCTGATGAAGATTTCAAGGGTGCAGATCAC
AAGAGATTGAAAGCTAAACCTTGTCCTCCGAAGAAACTGCTGAGTAAGGTGGTAAAAGAT
GACTTTGTAGATTTTGAAGCAGAAGTGAGTCAAGACGGTGTGCCAATATCAACTGATGAA
GAGGATGATTCAGAAGCTGATCCGGCTGTGTTGGAAGAGATGAAAAACTTTGTTAACGAT
GCCTCCGTATTGACTCAACACGTCGGAAATGGTCCTGCCGTAGATGAACATGCCATGTAT
CTCTGTGGAAATGCTGATTTTTTTGATGAAGGCGGGCAGTTTGGAAATAACAAAGCCAAA
TTCAAGCTTGCATTCAATATAAGAAGTGATGTTGATGTTTTTTCTCAAGAACCTGCTGAT
CATGAATCGGATTATGAGCAAGACAGCTTCGTGTGTGACGATGAAGTTCAACATGATTCG
ACAGATTTTGGTGAAATAACCTTGTTGGATCGCATTGATTCTCCGATTTTAGCAGGAAAG
TTGACTCGTCGTCAGGTTGAGTTGAATCGATTGAAAAAATTCAACAAAGACTCGTCTGCT
GTGACAGAAAAGAAAAATCAGACCTCAAAAAAAGCAGCTCCCCGAAAACGTATCATATGT
TTCGATGATTCAACGGAAAGTACAGAGAGTGTTAAGTCACCGGACAATTTTCATAAGAAG
ATACCAGAAAATGAAACTGGTTGGACATGTCCTGCTTGTACTTTGTTGAACAAGCCCAGT
TGTATGACATGCGAACTATGTGACTGTGAAAAACCATCCCCACAAGTTGCGAGTCAACCT
GCATGGACTTGTAAATCTTGCACTTACATTAATGGAGGACAAAATGATGTTTGTATCATG
TGTGGGAAGTTACGAATGCATCAGAAAAGTAAACAAAAAGCTCGTAAAAGCGATGAGCGA
CAACAACCTTGCACCAGTAGAGATGAAAGTTTTACCAATATAAGATTAACTGATGCAGAC
CGCCACAAAGTTTTATCAGGGAGAGCAGATAAAAGTACTAATATGCAAGATACCAGCTGT
TCAGCCTCGGCATCCCGCTTAGTAGGAACACCGACCGGAAATCTAGAAATTGAGGAACGT
TTGAAAAGAGTCATGAAAAAACGATTGGATTTCAAAGCTAAGCGGGAAAGCCTTGGAGCC
CATCATCAAGTCAAAGTGCCTATGAAATCTGTTGGTCAAGATCGGGATAAATCCACGTCT
GATGCAAAGCCATCAGCTCAAGATGTCATCAACTCTTCTGTTGTCAGTCCTGCAAAGAAA
TCTGATACTGTGTCGGGACCTATCGTTGTTTTGGTTGATAGCAAGGAATTATCAAGTAGT
CAGCCAATCATCACAATGTTGAGGAGCAAGTTTGAGGCGAATGTAACTGTTGCATCATTA
CCACACTGTGACTATATAATTGGGATCGGAACTGCCGTTACAAGATTAATGCTTTCTGAA
GTTTCACAAGTTTCCAGTAAACAAAAATTGTCAACGAAATTTCAACAGCTTAATGTCCAT
TATGACCGTGTTTATGCAATTATTGAACAGGACTCGGTGAAAAAAGGTGATTGGTCAAGA
CGGATCATACGCTCAACCCATTTCATGTCAATGATGTGCTGCCTTGCTCAATGTAACATC
AGGGTCTTGTATAGCGACAATCAGGATGAAACCGCAGGTATTTTGAAAATGCTTGCAGCA
AGAGAACGTGACCTCAAACGCGCCATTAGCGTCGATGCTGCAGCCAAGGCAAATGATTCA
AACTCCAGATTACTTCTGAAGTTATTTCTGAACATGCCAAAAGTATCATTTGTCTCTGCT
CTCTACATGTGTCTGCACTTCAAAACTTTCAAAGAAGCAGCTTCAAGTTCTGTAGAGAAA
TTGATACAGAAGGCTCATTTGTCTACATACGCGGCTGCAGAAGTGTACACGTTTTGCAGA
AGGAAGTTTGATATACAAATGACACCAACGAGATGATCTTATTCTTTCATTTATATGAAT
TTCAGAGTCTTTCCTAAACATTTATT
| SMART |
Helicase_ATP-bd (IPR014001) - T[121-323] 3.9E-24 |
| Pfam |
Helicase/UvrB_N (IPR006935) - T[129-283] 3.2E-21 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[132-301] 20.707 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[168-317] 7.07E-46 - T[511-654] 7.07E-46 |
| CDD |
Helicase_C (IPR001650) - T[504-647] 6.91069E-24 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[519-687] 18.416 |
| Pfam |
Helicase_C (IPR001650) - T[521-639] 1.4E-19 |
| SMART |
Helicase_C (IPR001650) - T[548-640] 8.2E-17 |
| Pfam |
FANCM-MHF-bd (IPR031879) - T[739-829] 3.0E-13 |
| ProSiteProfiles |
Znf_RanBP2 (IPR001876) - T[1724-1753] 8.513 |
| SMART |
Znf_RanBP2 (IPR001876) - T[1726-1750] 0.44 - T[1760-1784] 0.014 |
| ProSitePatterns |
Znf_RanBP2 (IPR001876) - T[1728-1747] . - T[1762-1781] . |
| SUPERFAMILY |
Znf_RanBP2_sf (IPR036443) - T[1759-1785] 4.24E-5 |
| SUPERFAMILY |
Restrct_endonuc-II-like (IPR011335) - T[1927-2061] 2.44E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FANCM_HUMAN | 46.276 % | 737 | 0 |