- Transcript 'Boleac.CG.SB_v3.S245...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S245.g05848.01.t
Possible name(s)
MKRN1; MKRN2; MKRN3
Gene model
Location
S245 [1,074 / 4,342]
Amino acid sequence
Length: 418
>Boleac.CG.SB_v3.S245.g05848.01.p
MATAPSPSKSXNREQKSKILCRYYVHGACWYGDECRFSHDLHDKPNLVCTYHKKGQCAYG
KECRYDHVRERREHHKDSNPATNILSAKNPNASFTPHDENWADAAEFVPGASYSPRVVSS
YSGVLKTNMANEESADLGCSGNPSSPTEELCPYNVVGECPNGDNCFSLHGLMCDMCGLKI
LHPNNKAQQQKHKSECLASHEEDMKVSFNVAQSAKVTCGICMEVVWEKKEKRDQKFGILE
NCNHSYCLECIRKWRSAKSFQNTVVRACPECRVSSSFVTPXEIWVTDPEEKKKLIEGYKS
HLAKKPCXHFDQGRGQCPFGANCFYQHAYPDGTKQDRSKIPRRARNANGTWKDMDMSTIW
RFIENRETFDIVGAVEEDDMDYFDLIYLLGVNSTSDDDMDSLDWYMDSDDSSDGVLVI
Nucleotide sequence
Length: 1,650
>Boleac.CG.SB_v3.S245.g05848.01.t
AGCATTCTTTTGCGACACATAACTATCAGCTGACTTATANCTGGTTGACACTTTGTGGTA
CCAGGCGCGGCTGCGCGACAGCCAAACTTCAATATGGCTACTGCACCATCTCCTTCCAAA
AGTGANAACCGTGAGCAAAAAAGCAAGATACTATGCAGGTATTATGTTCACGGTGCATGT
TGGTATGGAGACGAATGTCGTTTTTCTCATGACCTTCATGATAAGCCGAATTTGGTGTGC
ACGTACCATAAGAAAGGTCAATGTGCATATGGAAAAGAATGCAGATATGATCATGTCAGA
GAAAGAAGAGAACATCACAAAGATTCTAACCCTGCCACTAATATTCTATCCGCCAAAAAT
CCAAATGCTTCTTTTACTCCTCATGATGAAAACTGGGCTGACGCTGCGGAATTTGTTCCT
GGTGCATCTTACTCACCACGAGTCGTTTCTTCATATAGTGGTGTGCTGAAGACTAACATG
GCAAATGAAGAAAGTGCTGACTTGGGATGCTCAGGGAATCCAAGCTCTCCAACTGAAGAG
TTGTGTCCATACAATGTCGTAGGGGAATGCCCGAATGGTGACAATTGTTTTTCTCTTCAC
GGACTGATGTGTGACATGTGTGGGTTAAAGATCCTTCATCCCAACAACAAAGCTCAACAA
CAGAAACACAAATCTGAATGCTTGGCATCACATGAGGAAGACATGAAGGTTTCTTTCAAC
GTCGCTCAGAGTGCTAAAGTTACATGTGGGATTTGCATGGAAGTTGTCTGGGAAAAGAAA
GAAAAGCGAGATCAAAAGTTCGGGATATTAGAGAATTGCAACCATTCCTATTGCCTCGAA
TGCATACGAAAATGGAGAAGTGCTAAATCATTTCAGAACACTGTAGTGAGGGCTTGTCCT
GAGTGCAGAGTTTCAAGCTCTTTTGTTACACCAAGNGAAATCTGGGTGACTGATCCAGAG
GAAAAGAAGAAATTGATTGAAGGCTACAAATCTCATTTAGCCAAAAAGCCATGTAANCAT
TTCGACCAAGGAAGGGGTCAGTGCCCATTTGGTGCAAACTGTTTTTATCAACATGCATAT
CCTGATGGCACAAAGCAGGATCGTTCAAAGATTCCAAGAAGAGCTAGGAATGCAAATGGC
ACTTGGAAAGATATGGATATGTCAACCATATGGCGTTTCATCGAGAACAGGGAGACATTT
GATATTGTTGGTGCCGTGGAGGAAGATGATATGGATTACTTTGATCTGATTTATCTCCTT
GGGGTNAATTCAACCTCAGATGACGACATGGACTCATTGGATTGGTACATGGACTCTGAT
GATAGTAGTGATGGCGTGCTGGTAATTTGACGTCAGTACCACATAATCATGTCTCTTCAA
NCTGTTGTGCACTGTAGTNTTCACATGCCATGAATACCGCTTGGTTGCTTGTATGGAGTG
GGGTGATGTTATTTCGATGCTCACTGTGCTCATCCACACCCTACAATCCGGAACCAGGTG
GCTTAATGTAATCCTCANTACTGTTACTCATCAGTAGTAAATGTCTGTTATTACTAAACC
AGTTTTAAACCCATGTATTATGTTTGATTATAACCAACCATTGATGAACGGTAATGCAAA
ATTAAAGCTGGTGATTTTACTGATAAAGAA
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[15-42] 15.835 - T[43-70] 12.793 - T[145-172] 11.329 - T[302-330] 13.131 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[15-40] 5.36E-7 |
| SMART |
Znf_CCCH (IPR000571) - T[16-41] 9.6E-7 - T[44-69] 0.03 - T[145-171] 0.056 - T[303-329] 0.35 |
| Pfam |
Znf_CCCH (IPR000571) - T[20-40] 3.3E-6 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[207-303] 1.7E-10 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[218-272] 12.047 |
| SMART |
Znf_RING (IPR001841) - T[218-271] 3.8E-7 |
| Pfam |
Znf_C3HC4_RING-type (IPR018957) - T[218-271] 1.7E-6 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[242-251] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MKRN1_HUMAN | 40.61 % | 333 | 1.8E-110 |
| MKRN4_HUMAN | 40.447 % | 318 | 5.35E-105 |
| MKRN2_HUMAN | 37.981 % | 295 | 8.73E-97 |