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- Transcript 'Boleac.CG.SB_v3.S23....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S23.g05396.01.t
Possible name(s)
SGTA; TOMM70; TTC1
Gene model
Location
S23 [35,392 / 40,180]
Amino acid sequence
Length: 583
>Boleac.CG.SB_v3.S23.g05396.01.p
MSGQQESNWPTWKVALAISVPVAVGGVLYYQYVHKKKGTSPLQQPSPTSGVVTGTPEDNT
QKEFDHHPPSEDPFKAATLKKNEGNSAFKQGNFLEAIEKYTDAISICPRDKRQELSTYHQ
NKAAAYEKLGNNEGVVEECTKAIEHNPRYVKALYRRSRALEALGXKRECLEDMTAVCIME
QFQNAASMMFADKVLKEIGKEMAYERYRNRELIMPSVLFVKQYFASFTEDVISXPLKXEE
RLHTDSGYVRAKLALEXGDLSKVIPECTAEIEALSGSGDSITGTKDTVASPTSDESPKYL
PAALLLRGTLHLLQGKSSAALIDIDRVIEMDTADIKLRANALVKRGSLYMQEQRADKAQE
DFDYAVKLDPQNTDVLHHRGQLHILVDKIEEALKDFEECMRIKPEFALAHAQHCYSVYRQ
SFVHRDVVATQRALASFEELIKKTPFCSESFGLYAQALTDQGNFQKADEMFQKAIEVEPD
NATQYVHRGLLWLQWKQDVEASVKFVQQAINIDDKCDFAHETMGTIEVQRGNLEKASQHF
EIAINMAKSEMEMAHLFSLKAAAVAQANLAKKYGIKTPAFPSS
Nucleotide sequence
Length: 1,955
>Boleac.CG.SB_v3.S23.g05396.01.t
AGTTATTTGATCGTGTGTTATTTTGAGGAGAAATACCGGTAGGCCTACATAGCCCTATAG
GTAAAGATAATGTCTGGTCAGCAAGAAAGTAACTGGCCAACATGGAAGGTTGCTTTGGCC
ATCTCAGTACCAGTAGCAGTTGGTGGTGTGTTATACTACCAATATGTTCACAAAAAGAAA
GGAACATCTCCATTACAGCAACCATCCCCAACTTCTGGTGTTGTTACCGGTACTCCAGAA
GATAATACACAAAAAGAATTTGATCATCACCCACCATCTGAGGATCCATTCAAAGCTGCG
ACATTGAAGAAAAATGAAGGGAACTCTGCATTCAAGCAAGGAAATTTTCTTGAGGCTATT
GAGAAATACACCGACGCTATATCCATATGTCCCAGGGACAAAAGGCAGGAGCTTTCCACA
TATCATCAAAATAAAGCTGCTGCATATGAGAAGTTGGGTAACAATGAAGGTGTTGTAGAA
GAATGCACGAAAGCGATTGAACACAATCCAAGATATGTGAAAGCCTTGTATCGACGATCA
CGAGCTCTTGAAGCTTTGGGAANGAAACGTGAATGTTTAGAAGATATGACTGCAGTATGC
ATAATGGAGCAATTTCAGAATGCTGCAAGCATGATGTTTGCTGACAAAGTTTTGAAGGAA
ATTGGNAAAGAAATGGCATATGAACGATACAGGAACAGGGAACTGATCATGCCATCTGTG
CTTTTTGTCAAACAATACTTTGCTAGCTTCACAGAAGATGTCATATCTCANCCGTTGAAA
GANGAAGAAAGGCTTCATACTGATAGTGGCTATGTCCGTGCAAAGCTGGCGTTAGAGNGA
GGAGATCTGTCGAAAGTTATTCCNGAGTGTACTGCAGAAATTGAAGCTTTATCTGGCTCA
GGAGATTCTATCACTGGTACTAAAGACACAGTTGCGTCACCCACGAGTGATGAATCACCT
AAATATTTGCCTGCTGCTCTTCTGCTGAGAGGTACATTGCACCTTTTGCAAGGCAAATCC
AGTGCTGCTCTTATAGATATTGACCGGGTGATTGAAATGGACACTGCTGATATAAAACTC
AGAGCCAACGCTCTGGTCAAGAGAGGCAGTTTGTACATGCAAGAACAAAGAGCTGACAAA
GCACAGGAAGATTTCGATTATGCTGTTAAGCTTGATCCCCAAAATACAGACGTTCTTCAC
CATCGTGGTCAGTTGCATATTCTAGTTGATAAGATTGAAGAGGCCCTGAAAGACTTCGAA
GAATGCATGAGAATTAAACCAGAATTTGCCCTCGCTCATGCTCAACACTGCTACTCTGTT
TACAGACAATCTTTTGTTCACCGCGATGTTGTGGCAACTCAACGTGCTCTGGCTAGCTTT
GAAGAACTAATTAAAAAGACGCCCTTTTGCTCAGAAAGTTTTGGACTTTATGCACAGGCA
CTGACCGATCAGGGCAACTTCCAAAAAGCTGATGAAATGTTTCAAAAGGCAATTGAAGTG
GAACCTGATAATGCAACACAATATGTTCATAGGGGGTTGCTATGGTTGCAATGGAAACAA
GATGTCGAAGCTAGTGTCAAATTTGTTCAACAAGCAATTAATATTGATGACAAATGTGAT
TTCGCACATGAAACAATGGGAACAATTGAAGTTCAAAGGGGTAACTTGGAGAAGGCATCA
CAGCATTTTGAAATTGCCATCAACATGGCCAAGTCCGAGATGGAGATGGCTCATTTATTC
TCACTAAAAGCTGCCGCTGTTGCGCAAGCCAATCTGGCGAAGAAATACGGAATTAAAACT
CCGGCGTTTCCGTCGTCATGAGGCACGTAGCACTGCTTCTGATCAATAAACTTGTTAGAG
AACATACTCGATGCACGTAAAAGACCGCGGCCTGCGACCAAATCAGTCATTTTGTCTAAA
TTTTCTTTTTGCATTCAATAAACAAATAAGGACCG
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[61-180] 1.4E-27 - T[181-576] 3.3E-69 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[77-175] 6.92E-22 - T[308-549] 2.4E-27 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[77-110] 8.998 - T[116-149] 6.313 - T[301-334] 6.461 - T[339-372] 12.036 - T[373-406] 10.03 - T[448-481] 11.387 - T[517-550] 7.464 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[77-149] 11.854 - T[301-550] 37.725 |
| SMART |
TPR_repeat (IPR019734) - T[77-110] 0.028 - T[116-149] 0.039 - T[301-334] 1.1 - T[339-372] 0.0068 - T[373-406] 0.023 - T[448-481] 0.065 - T[482-516] 350.0 - T[517-550] 68.0 |
| Pfam |
TPR_repeat (IPR019734) - T[339-372] 0.0013 - T[374-405] 0.04 - T[449-481] 6.5E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TOM70_HUMAN | 48.671 % | 569 | 0 |