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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'KH2012:KH.C4.420.v1....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S6...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  5. Transcript 'Boleac.CG.SB_v3.S234...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S234.g05552.01.t

Possible name(s)

DAZAP1; MSI1; MSI2

Gene model

Boleac.CG.SB_v3.S234.g05552

Location

S234 [55,552 / 57,792]

Sequences

Amino acid sequence

Length: 122

>Boleac.CG.SB_v3.S234.g05552.01.p
MDPESQPTVSVNADTADPGKMFVGGLNLQTTADTRYSVTHADQIFLEGLKEYFSKYGEVS
ESIVMKDPVTTTSRGFGFVTFQDPKSVEKVLESSPHGLDHKTIDPKIAVPRSKKPKKDAP
EK

Nucleotide sequence

Length: 369

>Boleac.CG.SB_v3.S234.g05552.01.t
ATGGATCCGGAGAGTCAACCAACTGTCAGCGTAAATGCCGATACAGCAGATCCCGGAAAA
ATGTTCGTTGGTGGATTGAATTTACAAACGACTGCAGACACAAGGTATAGTGTAACACAC
GCGGATCAAATATTTTTAGAAGGATTGAAAGAATATTTCAGCAAGTACGGAGAAGTTTCT
GAATCCATTGTGATGAAGGACCCCGTAACAACTACTTCAAGAGGGTTTGGATTCGTCACT
TTTCAAGACCCCAAGAGCGTCGAAAAAGTGCTTGAGAGCAGTCCCCACGGACTGGACCAC
AAAACCATTGATCCCAAGATCGCTGTGCCTAGGAGTAAAAAACCAAAGAAGGATGCACCC
GAAAAGTAA

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[18-116] 9.5E-21
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[19-117] 2.28E-18
ProSiteProfiles
RRM_dom (IPR000504) - T[19-114] 15.033
SMART
RRM_dom (IPR000504) - T[20-106] 2.2E-14
Pfam
RRM_dom (IPR000504) - T[47-93] 1.9E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MSI2H_HUMAN 53.271 % 114 7.78E-32
MSI1H_HUMAN 51.351 % 111 1.41E-30
DAZP1_HUMAN 44.144 % 99 1.19E-25