- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Clone 'cilv041o10' >
- Transcript 'Boleac.CG.SB_v3.S233...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S233.g05521.01.t
Possible name(s)
KCNB1; KCNB2; KCNF1
Gene model
Location
S233 [14,398 / 18,494]
Amino acid sequence
Length: 414
>Boleac.CG.SB_v3.S233.g05521.01.p
MTTNSLYLCHPTRIHAKVDGAWQAIGRSPMGRLFPTNADLAPCISLRRESARCRELLCDD
FDESSEVYFFDRDPDAFFWILRCYRQRVVHIPKSICAVRFAEEQKYWGIDDAVLDGNFTE
RLEDAKALVQEFEEKARICERTRSLVEEHGAIRWTIWLGFNEPSSSVFGKLWAVISVSVI
LLSLVTFVVETLPSIQVVDEDGHEMENESIALIEEICSVWFTMEYLLRLLASSGKIAFIR
QPMNVIDLITIIPYYVQLFLSLHPEYDGELGSVSHVFQIFRVMRVMRVLRLGRHSSGLQV
LCKTMVKSSSELALLGLYMLIGILIIXTAVQCLEPNIFPSIGEALWWATITITTVGYGDI
YPETIPGKLVATLAFFAGVFVIGVPTHPVIANFTDYYQRAAEIENAFERNRKKE
Nucleotide sequence
Length: 1,242
>Boleac.CG.SB_v3.S233.g05521.01.t
ATGACAACTAACAGTCTTTATTTGTGTCATCCGACCCGAATTCATGCCAAAGTTGATGGG
GCTTGGCAGGCTATTGGCCGAAGTCCTATGGGCCGGCTGTTCCCCACCAACGCAGACTTA
GCCCCATGTATCTCATTGCGCAGGGAATCGGCACGTTGTAGGGAGCTTCTGTGCGACGAT
TTCGACGAGTCATCTGAAGTGTATTTCTTCGATAGAGACCCCGATGCATTCTTCTGGATT
CTGCGATGCTATCGCCAACGTGTGGTTCATATTCCGAAATCAATCTGCGCCGTTAGGTTT
GCGGAGGAACAGAAATATTGGGGTATCGATGACGCTGTTCTTGATGGCAACTTCACAGAA
AGGCTTGAGGACGCGAAGGCATTGGTGCAGGAGTTTGAGGAGAAAGCTCGCATTTGCGAA
AGAACTCGCAGTTTGGTTGAGGAGCATGGCGCAATTCGATGGACTATTTGGCTTGGATTC
AACGAACCATCATCATCTGTTTTCGGTAAATTATGGGCAGTTATCTCAGTGAGTGTTATT
TTACTATCACTCGTCACTTTTGTGGTGGAAACACTGCCATCCATTCAAGTTGTCGATGAG
GACGGACATGAGATGGAAAATGAAAGCATTGCGTTGATTGAAGAGATATGCAGCGTGTGG
TTTACGATGGAGTATTTGCTCCGTCTTCTCGCTTCGTCTGGGAAAATTGCGTTTATCCGC
CAACCAATGAACGTCATAGATCTAATTACAATCATCCCATATTATGTACAATTATTCTTG
TCATTACACCCAGAGTATGATGGCGAACTTGGGTCCGTTTCTCACGTATTTCAGATCTTC
CGTGTCATGCGAGTGATGCGCGTGCTACGACTGGGAAGACATTCATCAGGTTTACAAGTG
CTTTGTAAGACGATGGTGAAAAGCTCATCGGAACTAGCCCTTCTTGGATTGTATATGTTG
ATCGGAATACTGATAATANCGACTGCGGTACAATGCTTAGAGCCGAACATATTTCCAAGC
ATTGGAGAAGCCTTGTGGTGGGCTACGATTACGATAACTACAGTTGGTTATGGCGATATA
TATCCAGAAACCATACCCGGTAAACTTGTGGCAACATTGGCGTTTTTCGCAGGAGTTTTT
GTAATTGGCGTGCCAACTCATCCGGTTATTGCAAACTTTACCGATTATTACCAGCGTGCA
GCCGAAATTGAAAATGCTTTTGAACGAAACAGAAAGAAGGAG
| PANTHER |
VG_K_chnl (IPR028325) - T[52-412] 7.7E-107 |
| Pfam |
T1-type_BTB (IPR003131) - T[53-114] 4.3E-12 |
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[53-115] 2.62E-14 |
| PRINTS |
K_chnl_volt-dep_Kv9 (IPR003971) - T[59-72] 8.5E-5 - T[83-98] 8.5E-5 - T[106-118] 8.5E-5 - T[377-395] 8.5E-5 |
| PRINTS |
VG_K_chnl (IPR028325) - T[67-86] 1.9E-65 - T[163-191] 1.9E-65 - T[212-235] 1.9E-65 - T[238-258] 1.9E-65 - T[282-308] 1.9E-65 - T[338-360] 1.9E-65 - T[367-393] 1.9E-65 |
| PRINTS |
K_chnl_volt-dep_Kv (IPR003968) - T[67-77] 1.5E-10 - T[287-295] 1.5E-10 - T[311-325] 1.5E-10 - T[378-389] 1.5E-10 |
| Gene3D |
Volt_channel_dom_sf (IPR027359) - T[141-294] 1.7E-42 |
| Pfam |
Ion_trans_dom (IPR005821) - T[170-400] 4.9E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KCNB1_HUMAN | 41.322 % | 280 | 2.18E-86 |
| KCNB2_HUMAN | 41.322 % | 278 | 3.44E-85 |
| KCNF1_HUMAN | 38.567 % | 263 | 3.84E-83 |