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TRANSCRIPT CARD

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  1. Molecular Tool 'cieg54j24-MO (Hamada's MO)'
  2. Molecular Tool 'cicl44i06-MO (Hamada's MO)'
  3. Molecular Tool 'cicl04l21-MO (Hamada's MO)'
  4. Molecular Tool 'cicl11b03-MO (Hamada's MO)'
  5. Transcript 'Boleac.CG.SB_v3.S22....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S22.g05196.01.t

Possible name(s)

ATG10; ATG3

Location

S22 [565,409 / 568,150]

Sequences

Amino acid sequence

Length: 273

>Boleac.CG.SB_v3.S22.g05196.01.p
MQNAFNAVKSGALGIAEMLTPVLKSSKFKESGVVTPEEFVAAGDFLVHHCPTWQWASGHK
SKVKEYLPENKQYLLTRNVPCHKRCKDMTHDETNEAVIEDEDGEGGWVDTHHNYGTESEK
PPDEPVEMTLNDQAAVDFVTKPDANQDPEAEGIVHTRTYDLHITYDKYYQTPRLWLSGYD
EQSNPLKMEQMYEDISQDHVNKTVTMEPHPNLPPPNMCSVHPCRHAEVMRKIMHTVEDGG
GKLEVQMYLLVFLKLMQAVIPTIEYDYTRHFTL

Nucleotide sequence

Length: 1,000

>Boleac.CG.SB_v3.S22.g05196.01.t
CTGTTGATTGTCAGGGCTTATGCAAGATCGGTATTTATAACTTGTGTGGAAAATTAGCAG
TAAAACTGAAACATAACAACTCAACAATATGCAAAACGCCTTCAATGCTGTGAAAAGTGG
AGCTTTGGGAATAGCAGAAATGCTTACTCCAGTCTTGAAGTCGTCAAAGTTTAAAGAAAG
CGGAGTAGTCACTCCCGAAGAGTTTGTTGCTGCGGGTGATTTTTTAGTCCATCATTGCCC
AACGTGGCAATGGGCATCTGGCCATAAATCAAAAGTTAAAGAATATCTGCCAGAGAACAA
ACAGTACCTGCTGACAAGAAATGTGCCTTGTCACAAACGATGCAAAGACATGACTCACGA
TGAAACAAATGAGGCTGTCATTGAAGATGAAGACGGTGAAGGTGGCTGGGTAGATACACA
TCACAACTATGGGACAGAATCTGAAAAACCACCAGACGAGCCAGTGGAAATGACTTTGAA
TGACCAAGCTGCAGTTGATTTTGTCACAAAACCAGATGCTAACCAAGATCCAGAAGCTGA
AGGGATAGTTCATACGAGGACATATGATCTGCATATAACGTACGATAAATACTATCAAAC
GCCAAGACTATGGTTATCCGGATATGATGAGCAATCTAACCCGTTAAAGATGGAGCAAAT
GTATGAAGACATTAGCCAGGATCATGTCAATAAAACTGTCACCATGGAGCCTCATCCAAA
CTTGCCGCCACCTAATATGTGTTCCGTGCATCCTTGCAGGCATGCCGAAGTCATGCGCAA
GATTATGCATACAGTGGAAGACGGAGGGGGGAAGTTGGAGGTACAGATGTACCTTTTAGT
ATTTCTGAAGTTGATGCAAGCAGTCATACCAACTATTGAATATGATTACACTAGACACTT
TACTTTGTGAACTGAGCATTCAATCTATCTTTTGACCTGTACTCTCTTGATGTTGAATAA
ATATGACTCCTGTGCCAGTGTGCGGTTGGGGCACCGTCGG

InterProScan

Pfam
Autophagy-rel_prot_3_N (IPR007134) - T[8-123] 1.8E-48
Pfam
Autophagy-rel_prot_3 (IPR007135) - T[163-224] 1.2E-18
Pfam
Autophagy-rel_prot_3_C (IPR019461) - T[245-268] 6.0E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ATG3_HUMAN 58.917 % 364 1.57E-127