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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'KH2012:KH.C11.549.v1...' > 
  3. Transcript 'Boleac.CG.SB_v3.S22....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S22.g05195.01.t

Possible name(s)

EREG; MUC13

Gene model

Boleac.CG.SB_v3.S22.g05195

Location

S22 [552,811 / 561,349]

Sequences

Amino acid sequence

Length: 418

>Boleac.CG.SB_v3.S22.g05195.01.p
MPKTYKNSDLSGGDENCANGETLTMQGCVPTCSAGHIWCDPGQECIAQSDNNGFICSCLP
GYYNDSLTKSCEVGRYFGGRIFFEETTAFALARSTDPMIEAESIVSQIYNSSLYYYKSSV
LSCSSNVTCSYELIYQNAKDVDVQYVQDVFVNKTGNCSSGNDIATQMNCTGSRDSGFVIC
GMDTFEAKTPKEDYTQYFATDSPGGQVSPFDLSGDQGIVCEPEGSFSDICDEGTGATCTV
SHSGSFYCSCEASYALPYAGATSCTEIKCESDADCSGGGIHGACEVYEQSPADNVCQCNW
GFTGNSCENPWWFIFTVLTGAFGLLAIVILVGCICMSTKTKTVKTDVQKDDLDLKNPFVD
FQPGVRAKVSTNIYSSVTDSISAPTTQGHSNPAFNNNAYDEREKATPYSAAAQGNDYF

Nucleotide sequence

Length: 2,624

>Boleac.CG.SB_v3.S22.g05195.01.t
ATGCCGAAGACGTATAAAAATTCAGATTTGTCCGGTGGTGATGAAAATTGTGCCAATGGG
GAAACTCTCACAATGCAAGGTTGTGTGCCCACATGTAGTGCTGGACATATCTGGTGCGAT
CCAGGTCAAGAGTGCATAGCACAGTCTGATAACAATGGTTTCATCTGTAGTTGCTTGCCC
GGTTATTATAACGATAGTCTCACCAAAAGCTGTGAAGTTGGAAGATACTTTGGTGGGAGA
ATATTCTTTGAAGAGACAACGGCCTTTGCTTTGGCCCGTTCTACGGACCCGATGATTGAA
GCAGAGTCTATTGTTTCTCAGATTTACAACAGCTCATTGTACTACTACAAGTCATCTGTC
TTGAGCTGTAGTAGTAATGTTACCTGTTCATATGAGTTGATATATCAAAATGCAAAGGAT
GTCGATGTACAGTATGTCCAAGATGTATTCGTGAATAAAACTGGGAACTGTTCCTCAGGC
AACGACATTGCGACTCAAATGAATTGTACAGGGTCACGTGACTCGGGCTTTGTAATATGT
GGTATGGATACATTTGAAGCAAAGACACCAAAAGAAGACTACACCCAGTACTTTGCTACT
GATAGTCCTGGGGGTCAAGTTTCACCATTCGACCTGAGTGGGGATCAAGGTATTGTATGT
GAGCCAGAGGGCTCCTTCTCGGATATCTGTGATGAAGGTACGGGAGCGACGTGTACTGTT
TCTCACAGTGGAAGCTTCTATTGTAGTTGCGAAGCATCATATGCCTTGCCGTATGCTGGT
GCAACAAGCTGTACAGAAATCAAGTGTGAATCTGATGCTGATTGTTCTGGTGGAGGTATT
CATGGCGCATGCGAGGTCTATGAACAGAGTCCCGCTGACAACGTTTGTCAATGCAACTGG
GGTTTCACTGGAAACAGTTGTGAAAATCCTTGGTGGTTCATCTTTACTGTGCTTACGGGA
GCATTTGGTCTACTTGCAATAGTTATCCTGGTAGGATGCATTTGTATGTCAACAAAAACA
AAGACGGTGAAGACTGATGTTCAGAAAGATGATCTTGACTTGAAGAATCCATTTGTTGAT
TTCCAACCTGGTGTAAGGGCAAAAGTCTCGACCAACATCTACAGCTCTGTCACTGATTCA
ATCAGCGCTCCTACGACGCAAGGGCACAGCAATCCTGCTTTCAATAATAATGCATATGAT
GAAAGGGAAAAAGCGACTCCGTATTCTGCTGCTGCACAAGGAAATGATTACTTTTGAATT
TAGATTTCTGCTGTGGAAGTATTCATACCCTTTTGTATTTATCAGCACATTTGTAGCTTT
TAATCATTCAAATCTACTGTACTTGAACCACATTCCAGTGTGAGCTCACCACATCACCTT
CAATGAATAGTAAAACGCACCCTTTTTGTATTTGTCGCACTGTATCATCAGTTCATATTT
TGAAGAGCAATGTGTACGATTTAATTTATAATTCTAATTTCTGTATGTGAAGCCATTCTG
TCTTCATCGTTGAAAGGCACTGTGAAGTGCCAGGGTTGAAAAATGTGGAGTGTCCAAAAA
GCGCATTCCAGAAAAATTTTACCTGCTTGAGTGAAGTTGATCGGGAAGTTTGGACTACTA
TGTCCGTGTAAGGATTGTGAAGTTCTGCAGGTAAACCTGGCAGAAAACACCTGAGAGCTT
CCCGGATATTCACATTTTTCCCTAGCAGTATTAATGGCCTTTATTATGAAAAGAGACATT
CCTGTCTGATTTTTTCATTGCTGCAATCGATGAAACGTCACGTCTTTGAAGTGAAACAGT
GTGGTACTCACTGAGATATTGGTTTTATACTGGTCAGTTTTGACATGGCTGTGTGATTCG
AAGTGATGTGTCACGACCAACCTGCGGTGATGACACAGCCGTATTAGAGGTTTGGTGTTT
CAATTTATTTGTGCCAATCCTGGAAATACTCAAATCGCAAGTCCAAATTTTAGACCTTGA
TGGCTCAAGATACCGGCTTGTCACCACGCGTTAGTTGTCATGCCTACTCAATTGTCACCC
TGTTTTATTGCAAATTTCAGACATATGAATCCGCTTAATATCTCAATGATTACTAGCCCG
CTTTCACTTAGAAAACACCCATTCACCCATGACAGTAACTTTACTTGTGCATCTACGTGT
TGCGGTTGAGATGATTTCATTGTGATGTTCTAATTTTGCCTCTTATACTATTGCCTTGTA
ATGATTTTTTTCCATGACATTGATTCAAACGATCCATTGCTATGTGCCATAATTAGTCGT
TGTGGATATCTATGGTATTGATTTTTATATTTTTAATGTCTGCCATCTTTCACGTGAAAT
AATTTTAACTGACAAAATCATGACAATCAATTCACGGCACGTTCACGTTTGCCAAAGTGG
TTTTTCTACTGTGTTGATTTTAGTTTGCAATTCTGTATAGTCACTTGAGAGCTGCAATTT
GTGATCAATCACTGACGGTTGTTGTCAACTTGTCCTTATGGGTATTGTGCTATACAGCCT
ACTTATCATGCTCGATTAAATTTTGTCGCGTTTTCATATTATCAGATTATTGTTGCATTG
TACAGAGCAAGTGATCAAATGTGCTCTGGCATGTTCAAGTAACA

InterProScan

PANTHER
HEG (IPR028720) - T[24-165] 9.9E-27 - T[215-389] 9.9E-27
ProSiteProfiles
EGF-like_dom (IPR000742) - T[29-72] 7.221 - T[265-308] 8.015
SMART
EGF-like_dom (IPR000742) - T[31-72] 0.29 - T[219-265] 6.3 - T[268-308] 8.2
ProSitePatterns
EGF-like_CS (IPR013032) - T[56-71] . - T[296-307] . - T[296-307] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value