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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C4.23.v4.A...'
  2. Transcript 'KH2012:KH.C3.314.v2....'
  3. Transcript 'Boleac.CG.SB_v3.S303...'
  4. Transcript 'Boleac.CG.SB_v3.S22....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S22.g05176.01.t

Possible name(s)

RPL6

Location

S22 [361,886 / 365,089]

Sequences

Amino acid sequence

Length: 275

>Boleac.CG.SB_v3.S22.g05176.01.p
MFSSFWIRLSEIDTTSSFPGLLPRPSPTNMTKGKHTPRNKPLAGGVNRYSKSRMFAKKAL
YKRKRVVTTIEKKRDSVTKIKQIGGEKNGGSRKVRIQKLPRYYPTEDVPRKLKSHGKKPF
SQHKRNLRASITPGTVLIVLTGRHKGKHVVFLKQLDSGLLLCTGPHKINGFPLRRLCQKF
VIATKTKIDITGVDIPRDFNDAYFKRAAKKKTKHGEGEIFDTKEETYEVSDKRKEDQKKV
DAMIMPIVKQTEFLEGYLASKFRLQTGQYPHNMVF

Nucleotide sequence

Length: 860

>Boleac.CG.SB_v3.S22.g05176.01.t
ATGTTTTCATCTTTCTGGATTCGCTTGAGCGAAATAGACACGACGAGTTCTTTTCCAGGT
CTGCTCCCGCGGCCTTCACCGACCAATATGACGAAGGGCAAACATACCCCACGTAATAAG
CCTCTTGCAGGCGGAGTGAACAGATACTCGAAGAGCCGCATGTTCGCTAAAAAAGCCTTG
TACAAAAGGAAAAGAGTAGTCACAACAATAGAGAAGAAGAGGGATTCTGTGACGAAAATC
AAGCAGATTGGTGGTGAGAAGAATGGTGGATCGAGGAAAGTGCGAATTCAGAAGCTGCCT
CGCTATTATCCCACTGAAGATGTTCCGCGTAAATTGAAATCTCACGGAAAGAAGCCGTTC
AGTCAGCACAAGAGAAATTTGCGTGCGTCCATAACTCCAGGGACTGTCCTGATCGTCCTT
ACTGGGAGACACAAGGGAAAACATGTGGTTTTCTTGAAACAGTTGGATTCTGGTCTGCTT
CTGTGCACTGGTCCTCATAAGATCAATGGATTTCCTTTGCGAAGACTCTGCCAGAAGTTT
GTCATTGCAACGAAAACAAAAATAGACATTACCGGTGTTGATATTCCTCGGGATTTTAAT
GATGCTTATTTCAAACGTGCGGCCAAGAAAAAGACCAAGCACGGTGAAGGGGAAATCTTT
GATACTAAAGAGGAGACCTATGAGGTATCAGACAAACGCAAGGAAGATCAAAAGAAGGTT
GATGCTATGATAATGCCCATAGTCAAGCAGACGGAGTTCCTGGAAGGCTACCTTGCATCC
AAGTTCAGACTGCAAACTGGGCAATATCCGCATAATATGGTCTTCTAATGCCTTCTCAAA
TAAAGATGTCTGTCAAAATA

InterProScan

PANTHER
60S_ribosomal_L6E (IPR000915) - T[32-275] 4.3E-99
Pfam
Ribosomal_L6_N (IPR005568) - T[32-77] 1.3E-10
SUPERFAMILY
Translation_prot_SH3-like_sf (IPR008991) - T[129-221] 3.61E-23
Gene3D
Rib_L2_dom2 (IPR014722) - T[129-214] 7.8E-11
Pfam
60S_ribosomal_L6E (IPR000915) - T[168-275] 2.4E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL6_HUMAN 58.537 % 287 1.5E-97