- Transcript 'Boleac.CG.SB_v3.S228...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S228.g05358.01.t
Possible name(s)
ATOH1
Gene model
Location
S228 [94,939 / 99,210]
Amino acid sequence
Length: 400
>Boleac.CG.SB_v3.S228.g05358.01.p
MSSSYAIDYPVAAQASGIALQTTFKKRNSSQVHAPRRRKRSKAASQEKERLKVFNEALET
LQNVLPVRLPKGRKLHKKQTLQVYVNTLDSTLASTGLSFDEDVCNANYKTIIKLASCYIQ
FLQGCLEGTHDWNERHRFLWCTGAGNEEFLHAIDEAANGKDMGQRNDNSMEKDCDTRDDV
TPXQCSSLERRRYENSDQFLSYEVEEQCVLDHVGQSSSQHFPLQSECTCTTDTFIFEELP
QQHDQIGSFYTDHYRSFPSREANYFQDIPLEVVNNLLWSDGYPNSNACVSNNSLLELQEV
LPMRLPVGRRLHKKKILELAISYINFLQECLMGTKQFEDRHRFMWKSGSQEADFLNTIDA
VPHQKNIPDVYSVIIEKVQRLVEDVRVIVQATTPGVVVVS
Nucleotide sequence
Length: 1,203
>Boleac.CG.SB_v3.S228.g05358.01.t
ATGTCCTCAAGTTATGCAATTGACTATCCAGTCGCTGCGCAGGCATCTGGAATCGCTCTT
CAAACTACTTTCAAGAAGCGAAATTCGTCACAGGTACACGCACCTAGACGACGAAAACGA
TCAAAGGCTGCGTCGCAGGAAAAAGAAAGACTGAAGGTCTTCAACGAAGCGCTGGAAACT
TTGCAGAACGTTCTACCTGTCAGGCTTCCAAAAGGCAGAAAACTTCATAAAAAGCAAACT
TTGCAGGTATATGTAAATACGTTAGATTCTACTCTGGCTTCAACTGGATTATCGTTTGAC
GAAGATGTATGCAACGCCAATTACAAAACGATTATAAAACTTGCGTCCTGCTACATTCAA
TTTTTACAAGGTTGCTTGGAAGGAACGCACGATTGGAACGAGCGACATCGTTTTCTTTGG
TGCACCGGTGCTGGCAACGAAGAGTTTCTTCACGCAATTGATGAGGCTGCAAATGGTAAG
GACATGGGCCAGCGAAACGATAATAGTATGGAAAAAGATTGTGATACAAGAGACGACGTT
ACTCCTANACAATGCAGCAGTCTTGAGAGGCGTCGATATGAAAATAGCGATCAGTTTCTG
TCTTACGAAGTTGAAGAGCAATGCGTTCTTGATCACGTTGGACAATCAAGTAGCCAACAT
TTCCCACTTCAATCAGAATGTACTTGCACCACAGATACATTCATTTTTGAGGAGTTGCCA
CAACAACACGATCAAATCGGTTCTTTCTATACTGATCATTATAGATCGTTTCCAAGCCGA
GAAGCAAACTATTTTCAAGATATTCCATTGGAAGTCGTCAACAATCTTTTGTGGAGTGAT
GGTTACCCGAACTCCAATGCATGCGTGTCAAATAATTCTTTGTTGGAATTGCAAGAAGTC
CTTCCAATGCGATTGCCTGTNGGAAGAAGACTTCATAAAAAGAAGATCCTTGAACTGGCA
ATATCCTACATCAATTTTCTGCAAGAGTGTTTAATGGGGACAAAGCAATTCGAAGATCGT
CATCGATTCATGTGGAAGTCAGGATCACAAGAAGCTGACTTTTTGAACACCATTGATGCC
GTTCCGCATCAGAAGAATATACCGGACGTGTATTCTGTAATAATCGAGAAGGTTCAGAGG
CTGGTAGAAGATGTACGTGTTATTGTACAAGCAACAACACCAGGTGTTGTTGTTGTCAGC
TGA
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[30-93] 1.1E-6 - T[285-340] 1.5E-7 |
| PANTHER |
Twist-related (IPR015789) - T[32-83] 2.7E-33 - T[113-219] 2.7E-33 - T[291-361] 2.7E-33 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[36-68] 2.93E-6 - T[101-138] 2.93E-6 - T[291-340] 4.84E-7 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[38-91] 8.962 |
| Pfam |
bHLH_dom (IPR011598) - T[291-328] 7.4E-5 |
| CDD |
bHLH_dom (IPR011598) - T[291-329] 3.51041E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|
