- Transcript 'Boleac.CG.SB_v3.S227...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S227.g05331.01.t
Possible name(s)
ZIC3; ZIC4; ZIC5
Gene model
Location
S227 [23,422 / 26,561]
Amino acid sequence
Length: 389
>Boleac.CG.SB_v3.S227.g05331.01.p
MKDVRETEEESRVNREGQLQSVYPVCHQAYPTFYDCTSHVNVNNNCSINQQCFYPYHQLT
HKVSALDIPQQSQSYSQQQCYDGIYRDASPSAITPYAGFPNYRRFTPENFVPMTSEDTFY
DTPYPSHMAGHYQDSQGGFAVGFHASHSCNYKFPHSGKVHPSQQSFGEIYPYVLPASLSH
QLDCGYEEYVCKWLLPAXPDAKRVNQLELQQPCNAVLWTLADLVNHINNAHIGGPEQVDH
TCYWENCNRKRKTFKAKYKLVNHTRVHTGEKPFACPFAGCGKMFARSENLKIHKRIHTGE
RPFNCPYPGCDRKFANSSDRKKHSHVHTSDKPYTCKIRGCDKTYTHPSSLRKHMRIHEAQ
GDVLIPYTITTTPDSSPASHDNNCCQGQE
Nucleotide sequence
Length: 1,167
>Boleac.CG.SB_v3.S227.g05331.01.t
ATGAAAGACGTCCGAGAAACCGAAGAAGAGTCGAGAGTGAACCGTGAAGGCCAACTGCAA
AGTGTCTACCCAGTGTGTCATCAGGCATATCCAACATTCTATGATTGTACATCTCACGTA
AACGTAAACAATAACTGTTCTATCAATCAGCAATGTTTTTATCCTTATCATCAGCTTACT
CACAAAGTATCTGCTTTGGATATTCCCCAGCAAAGTCAATCGTACTCACAACAGCAATGT
TACGACGGTATATACAGAGACGCTTCTCCAAGTGCGATTACACCGTATGCTGGATTTCCG
AATTACCGTCGATTTACGCCAGAGAATTTCGTACCTATGACATCGGAAGATACGTTTTAT
GATACTCCGTACCCTTCTCACATGGCTGGACATTATCAAGACTCTCAAGGGGGCTTCGCA
GTAGGATTTCACGCTTCNCACAGCTGCAATTATAAGTTTCCTCACAGCGGTAAAGTTCAT
CCCTCTCAGCAATCATTCGGAGAGATTTATCCATATGTGCTGCCAGCGTCTTTGTCACAT
CAACTCGACTGTGGATATGAGGAATACGTTTGCAAATGGTTGTTGCCGGCANTGCCTGAT
GCCAAGAGAGTAAATCAGCTTGAGTTGCAACAACCTTGTAACGCTGTCTTATGGACTCTA
GCGGATTTAGTAAATCATATCAACAATGCTCATATCGGAGGCCCAGAACAAGTTGACCAT
ACATGCTACTGGGAAAATTGCAATCGCAAAAGAAAGACATTCAAGGCCAAGTACAAGCTC
GTCAATCACACTCGGGTTCACACAGGTGAAAAGCCTTTTGCCTGTCCGTTCGCTGGTTGT
GGAAAGATGTTTGCACGGAGTGAGAATTTGAAGATTCACAAACGAATTCATACCGGAGAA
AGACCGTTCAACTGTCCGTACCCTGGATGCGATAGAAAATTTGCGAACAGCTCGGATCGG
AAAAAACACAGCCATGTCCATACGTCAGACAAGCCATATACTTGCAAGATACGAGGATGC
GACAAGACCTACACGCACCCAAGCTCTTTACGAAAACATATGCGAATTCACGAGGCGCAA
GGAGACGTTCTGATTCCTTATACTATAACCACAACGCCTGACTCATCACCAGCCTCTCAC
GACAACAACTGCTGCCAAGGTCAAGAG
| SMART |
Znf_C2H2_type (IPR013087) - T[240-267] 7.3 - T[273-297] 4.0E-4 - T[303-327] 0.02 - T[333-357] 1.2E-5 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[245-272] 11.448 - T[273-302] 16.498 - T[303-332] 12.757 - T[333-362] 12.009 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[253-310] 3.21E-19 - T[314-358] 8.94E-12 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[275-297] . - T[305-327] . - T[335-357] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 66.082 % | 246 | 2.87E-79 |
| ZIC3_HUMAN | 59.794 % | 249 | 1.24E-78 |
| ZIC5_HUMAN | 63.736 % | 252 | 8.8E-78 |