- Transcript 'Boleac.CG.SB_v3.S225...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S225.g05309.01.t
Possible name(s)
NKX6-1; NKX6-2; NKX6-3
Gene model
Location
S225 [120,357 / 126,160]
Amino acid sequence
Length: 359
>Boleac.CG.SB_v3.S225.g05309.01.p
MIGKNGSHIFAKTMAQPPSFADFRRLNPSHYAARFMQMQQGGTPFGINDILNRRANAADM
NCDNRMVGNSSALAFSESMASKAMYLHESSIERGHHPSIPPSTIGLSSGVGYXQSLTDLP
VNPALYWPGLLHEDWADKRPRQSSLSNLGMEKCDKKKHTRPTFSGQQIFALEKTFEQTKY
LAGPERARLAYSLGMSESQVKVWFQNRRTKWRKRHAAEMASAKKKHDSEVQQKLTELPDP
DRPENVTNDNHNSEYIDPKSDDDVTETVNKLTMLKREKSRWNTTSTKRYGRMDTTIKRWA
SLLPRGSMTYNLTLNNSKTSKYEFAGDKRVEEFRNCMRCYEITLYFNRIVYISAIIGNT
Nucleotide sequence
Length: 1,080
>Boleac.CG.SB_v3.S225.g05309.01.t
ATGATTGGAAAGAATGGATCACATATTTTCGCAAAGACAATGGCGCAACCGCCAAGCTTC
GCAGATTTCAGACGTTTAAACCCGAGTCATTACGCGGCACGTTTCATGCAAATGCAACAA
GGCGGGACTCCTTTTGGTATCAATGATATTTTAAACCGNCGGGCTAACGCTGCCGATATG
AACTGTGACAATAGGATGGTTGGTAATTCAAGCGCTCTGGCGTTTTCGGAATCAATGGCC
TCAAAGGCCATGTATTTACATGAATCAAGCATCGAGCGAGGACATCATCCGTCCATACCA
CCAAGTACAATAGGATTATCTTCAGGGGTTGGCTACCNTCAATCTTTGACCGATCTCCCC
GTCAATCCAGCGTTATATTGGCCTGGTTTATTGCATGAAGACTGGGCTGACAAACGACCG
AGACAATCATCGTTATCAAATTTGGGAATGGAAAAATGTGATAAGAAGAAACATACTCGC
CCTACTTTCTCCGGACAACAAATATTCGCATTAGAAAAAACTTTTGAACAGACAAAATAC
CTCGCCGGTCCTGAAAGAGCTCGACTCGCCTATTCTTTAGGAATGTCAGAATCGCAAGTC
AAGGTTTGGTTTCAAAACCGGAGAACAAAATGGCGAAAACGCCACGCAGCAGAAATGGCC
TCGGCGAAAAAGAAACATGACAGCGAAGTACAACAAAAATTGACAGAATTACCAGATCCT
GATAGACCAGAAAACGTCACAAATGACAATCACAATTCCGAATACATAGACCCAAAAAGC
GACGACGATGTCACAGAAACGGTAAACAAATTGACAATGCTGAAACGTGAGAAATCAAGA
TGGAATACAACATCCACGAAACGGTATGGTAGAATGGACACCACAATCAAAAGATGGGCA
AGTCTACTACCTCGAGGCTCTATGACGTATAATCTGACTCTCAACAACAGCAAAACTTCG
AAATACGAATTCGCAGGAGACAAGCGCGTAGAAGAGTTCAGAAATTGCATGAGATGCTAT
GAGATTACACTTTACTTCAACCGCATCGTTTATATTTCAGCAATTATTGGAAATACATAG
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[151-220] 5.56E-23 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[154-214] 19.807 |
| SMART |
Homeobox_dom (IPR001356) - T[156-218] 1.8E-23 |
| Pfam |
Homeobox_dom (IPR001356) - T[157-213] 7.7E-21 |
| CDD |
Homeobox_dom (IPR001356) - T[157-215] 1.71959E-19 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[178-189] 2.1E-5 - T[193-203] 2.1E-5 - T[203-212] 2.1E-5 |
| PRINTS |
HTH_motif (IPR000047) - T[185-194] 3.2E-6 - T[194-210] 3.2E-6 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[189-212] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NKX62_HUMAN | 56.79 % | 181 | 9.16E-55 |
| NKX61_HUMAN | 56.97 % | 177 | 1.39E-52 |
| NKX63_HUMAN | 37.959 % | 135 | 2.5E-37 |