Aniseed - Transcript Card

Transcript 'Boleac.CG.SB_v3.S21....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S21.g04889.01.t

Possible name(s)

DUS1L; DUS2; DUS4L

Gene model

Boleac.CG.SB_v3.S21.g04889

Location

S21 [275,790 / 286,967]

Sequences

Amino acid sequence

Length: 405

>Boleac.CG.SB_v3.S21.g04889.01.p
MPVCVTEASKRYAGKVILAPMVRIGTLPSRLLALQYGADLVYSEELIDHRLVQCKRVENH
VLGTIDFIQDDSSRPMFQTCSEERDKVVLQMGTSDPERALKVAKLVQNDVSGIDINMGCP
KEYSTKGGMGAALLQTPDKVKAXLTTLVEGVDIPITCKIRILPKLEDTLALVKVXESTGV
VAIGVHGRLKEXRPRHPVHADVIKIIADALSIPVIANGGSEEIINTYKDIEKFRAMSGAS
SVMIARSAQWNMSIFREEGLLPTHDVIKDYLQLAIKYDNHFINCKFCIQEVMRDKLEGEI
GKLLHASVSLREICSVWDLETLYDETEKNRSALKIKLQYDSTGQPQTKRTKLADTVEMDF
TLKRARNKRIAEQSAAVVCLRSLGLEDGKLDVVNRKVTKDQPEGT

Nucleotide sequence

Length: 1,717

>Boleac.CG.SB_v3.S21.g04889.01.t
GGAATAGTGAGCGCTTATCATATAACTGCCTATACAATAACGATACTGCCGAACGAGCAG
CCGTTGCTTCACGAATTGCTGTTGTAGTACTGGTATTTCCTACTAGATACAGCTGCAGTG
CGCTACCCTTCCGAGTTGAAGATGCCTGTATGTGTCACGGAGGCCAGCAAACGCTATGCA
GGCAAAGTCATATTGGCACCAATGGTGAGAATCGGAACTCTGCCTTCTAGGCTTCTGGCC
CTCCAATATGGTGCTGATCTCGTATATTCTGAGGAACTTATTGATCACAGATTGGTGCAA
TGCAAGAGAGTTGAAAATCATGTGCTCGGTACCATTGACTTCATTCAAGATGACAGCAGC
AGACCCATGTTCCAAACATGCTCAGAAGAGCGGGACAAGGTTGTTTTGCAAATGGGAACA
TCGGACCCGGAGAGAGCATTAAAAGTNGCAAAGCTTGTGCAGAATGATGTTTCGGGGATT
GATATCAACATGGGATGCCCAAAAGAATATTCAACGAAGGGTGGGATGGGAGCAGCATTG
TTGCAGACACCNGATAAAGTGAAAGCTATNCTTACAACTCTTGTGGAGGGTGTTGATATT
CCAATAACCTGCAAGATCCGCATCTTGCCAAAGCTGGAAGATACCTTGGCTCTTGTAAAA
GTCATNGAAAGTACCGGAGTAGTTGCCATTGGTGTTCATGGACGTCTTAAAGAAGANCGG
CCACGACACCCAGTTCACGCCGATGTTATAAAGATTATAGCAGATGCTCTTTCAATTCCA
GTAATAGCAAATGGAGGATCAGAGGAAATAATTAACACTTACAAAGACATTGAAAAATTT
CGAGCGATGTCAGGAGCATCTTCAGTNATGATTGCACGATCAGCTCAGTGGAACATGTCA
ATATTTCGAGAAGAAGGTCTTCTACCAACTCACGATGTTATTAAAGATTATCTNCAATTA
GCTATTAAGTATGACAATCATTTCATAAATTGCAAATTCTGCATACAAGAGGTCATGAGA
GACAAACTAGAAGGAGAAATTGGAAAGTTGTTGCATGCATCAGTTTCGTTAAGAGAGATA
TGCTCAGTATGGGATCTCGAAACCCTTTATGATGAAACAGAGAAAAATCGTTCTGCCTTG
AAAATCAAGTTACAATATGATTCGACCGGGCAGCCGCAAACAAAGCGCACCAAATTAGCC
GATACTGTGGAAATGGATTTCACTTTGAAAAGGGCACGTAACAAGCGAATCGCGGAGCAA
AGTGCCGCCGTGGTGTGTTTGCGCAGTTTGGGGCTTGAAGATGGAAAGCTGGATGTTGTA
AACCGAAAAGTTACGAAAGATCAGCCAGAAGGCACATAACCACGGCTTACATCTCGCATC
GTGATACGTCAGGCGAGAGGTGCGCGGTTAGTTGGATCGCCAACTGAAGTGGTAGAAGGC
GCGTCATGTGCCATCCGGCTTTGAATATTGTATCGTCATTGATCTCTTCGTGTAGGTATG
TTTCGGAGGGAATGAAACGGACAGGCTAATATAATCGTTGTCATTGTGCATGAAATTTCA
TGGTGAGTTCATTGGATGATCGGTAGTGGTGTTCGTACATGAAATGCATCTGTCAAAATT
GTAGTATTCATTCTCACCGTTGATTTTGCGATATCGAATAAAGGACGGTCTATCGGCCTG
GTCAACACATATATTTCGGTGGACTTTGTGAGCCGTC

InterProScan

PANTHER	tRNA_hU_synthase (IPR001269) - T[10-352] 1.4E-124
Gene3D	Aldolase_TIM (IPR013785) - T[11-264] 2.4E-65
CDD	DUS-like_FMN-bd (IPR035587) - T[15-257] 2.14041E-87
Pfam	tRNA_hU_synthase (IPR001269) - T[17-258] 3.6E-47
ProSitePatterns	tRNA_hU_synthase_CS (IPR018517) - T[113-131] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DUS4L_HUMAN	31.939 %	123	4.63E-32
DUS1L_HUMAN	30.189 %	112	2.68E-27
DUS2L_HUMAN	50.575 %	429	2.3E-148