- Transcript 'Cisavi.CG.ENS81.R14....' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Molecular Tool 'pCi-Bra::Ci-macho1' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Boleac.CG.SB_v3.S216...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S216.g05051.01.t
Possible name(s)
SNX30; SNX4; SNX7
Gene model
Location
S216 [35,305 / 36,604]
Amino acid sequence
Length: 432
>Boleac.CG.SB_v3.S216.g05051.01.p
MATTEEGEYDMFDEEGAEVSINDEKGEDKKQTTLFGMMSVTVADPEKRVINKAGLKMQDT
YVAYLVETKPRDDKIVDEKLNEVSSVWRRYSEFELLRNYLALTYPTIVWPPLPEKRATHV
WTKIGSDTFDPEFLERRRAGLEAFLHRICRMQTKDDIILSFLKQEENWRESVMATEYQAQ
SDSWLKMLNASLRVKQIDPAFEDLKNYANELQTDIAGVLKARAKLADRIYALYKIHSNYS
RIFKEWSAIEDVSMAEALRKCSLEMDKFSNSIDGMMEEEELYAEQLKEYYNFGNSLKAII
KKHEALQYDVEYVENQLMSAHLEKKQVESGATKFNFSGMKARLFGGDTPEQKEAKLAKIE
ENIKKLDIEAENKKKAADDFGEQAKDEVLKFKRQKXIDLKEILTNYVILQIKMSKEAKIA
WDRFKTAVHSVQ
Nucleotide sequence
Length: 1,299
>Boleac.CG.SB_v3.S216.g05051.01.t
ATGGCAACAACGGAAGAGGGTGAGTATGATATGTTTGACGAAGAGGGGGCAGAGGTGTCA
ATCAATGATGAAAAGGGTGAGGATAAGAAGCAAACGACNCTATTTGGTATGATGTCAGTN
ACCGTAGCGGATCCCGAGAAACGGGTGATAAATAAAGCTGGGCTCAAAATGCAAGACACG
TATGTCGCATACCTTGTTGAAACAAAACCTCGTGATGACAAAATTGTCGATGAAAAATTG
AATGAAGTGTCATCAGTCTGGAGAAGATACAGCGAATTCGAACTTCTTAGAAATTACTTG
GCGCTTACATATCCTACAATTGTCTGGCCACCCCTACCAGAGAAAAGAGCTACACATGTT
TGGACAAAAATAGGATCAGACACATTTGATCCTGAATTTTTGGAGAGGAGAAGAGCTGGA
TTAGAGGCATTTTTGCATCGAATATGCCGCATGCAAACAAAGGATGACATTATTTTATCT
TTTTTGAAACAAGAAGAAAATTGGAGGGAGAGTGTCATGGCTACAGAATATCAGGCACAG
TCTGATTCATGGTTGAAAATGCTTAATGCATCTCTTCGCGTGAAGCAAATCGACCCCGCT
TTTGAAGACTTGAAAAATTATGCGAATGAATTGCAAACTGACATCGCCGGCGTCTTAAAA
GCCCGTGCAAAACTAGCAGACAGAATATATGCTCTATATAAAATACATTCCAACTATTCG
AGAATATTTAAAGAATGGAGTGCCATTGAAGATGTATCAATGGCTGAAGCCTTGCGTAAA
TGTTCTCTTGAAATGGATAAGTTTTCAAATTCCATAGATGGCATGATGGAAGAGGAGGAG
CTGTATGCTGAGCAGTTGAAGGAATATTACAACTTTGGTAATTCATTGAAAGCTATTATA
AAGAAACACGAGGCACTCCAATATGATGTGGAGTATGTGGAAAATCAATTGATGTCGGCT
CACTTGGAAAAAAAGCAAGTCGAAAGTGGAGCCACCAAGTTTAATTTTAGTGGAATGAAG
GCAAGACTNTTTGGAGGTGATACACCAGAGCAAAAAGAAGCTAAACTAGCCAAAATTGAG
GAGAATATCAAGAAACTTGATATAGAGGCNGAAAATAAGAAAAAGGCTGCTGATGACTTT
GGTGAGCAAGCAAAAGATGAAGTTCTAAAATTCAAACGACAAAAGNAAATTGATTTGAAA
GAAATCTTGACCAATTATGTAATATTGCAAATTAAAATGTCCAAAGAAGCAAAAATTGCA
TGGGATCGATTCAAAACTGCAGTGCACTCTGTTCAATGA
| Gene3D |
PX_dom_sf (IPR036871) - T[30-192] 7.7E-28 |
| PANTHER |
SNX4 (IPR034783) - T[31-417] 1.3E-111 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[38-167] 2.88E-23 |
| Pfam |
Phox (IPR001683) - T[40-164] 6.3E-18 |
| ProSiteProfiles |
Phox (IPR001683) - T[42-179] 15.302 |
| SMART |
Phox (IPR001683) - T[47-165] 2.7E-17 |
| Gene3D |
AH/BAR_dom_sf (IPR027267) - T[193-431] 9.4E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX30_HUMAN | 27.915 % | 79 | 6.36E-16 |
| SNX4_HUMAN | 44.501 % | 338 | 1.02E-112 |