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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.S988.1.v2....' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Clone 'cien70666' > 
  4. Transcript 'Moocci.CG.ELv1_2.S62...' > 
  5. Transcript 'Boleac.CG.SB_v3.S213...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S213.g04989.01.t

Possible name(s)

Boleac.CG.SB_v3.S213.g04989

Gene model

Boleac.CG.SB_v3.S213.g04989

Location

S213 [71,765 / 72,431]

Sequences

Amino acid sequence

Length: 221

>Boleac.CG.SB_v3.S213.g04989.01.p
MCAPLTSATTEEVAMAFLYHFVANHGVPKSLRTDQGPCFSSYQWQKFMRQLSIEHIKSLP
QTNGYAENALGKIKRILKAELTYGCALRIPGAFVENTNQQPNISDSELFEGINTFLQNVK
FPEVNIRPDRKAYLPQNLLNCTHVFLRMKGIPRGLAPRYTGPHRVIERSDSNNALTIIFK
NKPKLVAMDRCKAAYLLEADLENTAVDQRISNLPDIEDSHE

Nucleotide sequence

Length: 666

>Boleac.CG.SB_v3.S213.g04989.01.t
ATGTGCGCACCACTCACTTCAGCTACAACAGAAGAAGTTGCTATGGCATTCCTATATCAC
TTTGTGGCAAATCACGGGGTTCCAAAATCCTTGCGAACGGACCAGGGTCCCTGTTTCTCA
TCATATCAGTGGCAGAAATTCATGCGGCAATTATCTATTGAACATATCAAATCTCTACCT
CAAACGAACGGTTACGCAGAGAATGCCCTGGGAAAAATCAAACGCATTCTAAAAGCAGAG
CTGACATATGGATGCGCATTGCGAATTCCAGGCGCATTCGTGGAAAATACTAACCAGCAG
CCCAACATTTCCGATTCTGAATTATTCGAAGGCATCAACACCTTTCTCCAAAACGTCAAA
TTCCCAGAAGTCAATATACGTCCTGATCGTAAGGCATATTTGCCGCAAAATTTGCTGAAT
TGCACACATGTGTTTTTGAGAATGAAAGGTATTCCACGCGGGCTTGCACCGAGATATACA
GGTCCACATCGTGTTATCGAAAGATCAGATTCAAACAACGCACTAACAATTATTTTCAAA
AACAAACCTAAACTAGTTGCAATGGATAGATGTAAAGCGGCATATTTACTGGAAGCCGAC
CTAGAAAATACAGCAGTAGATCAACGCATATCAAACCTACCCGATATCGAAGACTCGCAC
GAGTAG

InterProScan

ProSiteProfiles
Integrase_cat-core (IPR001584) - T[1-143] 11.618
Gene3D
RNaseH_sf (IPR036397) - T[2-77] 9.3E-12
SUPERFAMILY
RNaseH-like_sf (IPR012337) - T[3-82] 1.26E-15
Pfam
Integrase_cat-core (IPR001584) - T[4-75] 2.4E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value