- Transcript 'Boleac.CG.SB_v3.S169...' >
- Transcript 'Boleac.CG.SB_v3.S212...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S212.g04969.01.t
Possible name(s)
ITGA3; ITGA6; ITGA7
Gene model
Location
S212 [91,413 / 93,246]
Amino acid sequence
Length: 292
>Boleac.CG.SB_v3.S212.g04969.01.p
MTCPVSEWRNQPDKRKCNEFPLNRDSYMGFSVAMSESILPNSKEIFYIAGAPRGNNSGAV
VFLRKRTGYADXADLRPDVENIVLGEATSSSFGYSVATXDLNGDGLDDLIVGAPQYYEHS
SKRKAGGAVYVYINEAGVGFRHIKPRVFYGPKESHFGQTVAALGDIDQDGYGDFAVGAPY
QDQYGVVHIYRGSANGIVKKSQTIFGKDYGYIGVASNQDLIGFGASLSGYVDADGNKYPD
LLIGSLSNHVTLIRARPIIEVHMTFEVDRNEIDLEEKDCDATWSCFKITYCF
Nucleotide sequence
Length: 876
>Boleac.CG.SB_v3.S212.g04969.01.t
ATGACATGTCCTGTAAGCGAGTGGCGAAACCAACCTGATAAACGAAAGTGTAACGAATTT
CCGTTGAACCGCGATTCATATATGGGGTTTTCGGTTGCGATGAGCGAGTCTATTTTGCCA
AATTCAAAAGAAATATTTTACATCGCTGGTGCTCCGAGAGGGAACAATTCTGGAGCAGTC
GTATTCCTCAGAAAAAGGACAGGTTACGCTGACNTCGCTGACCTACGNCCGGACGTTGAA
AATATCGTGTTGGGCGAAGCGACGTCTTCTAGCTTCGGTTATTCAGTCGCCACTNCTGAT
CTCAATGGAGACGGACTGGACGATTTGATAGTTGGAGCACCGCAGTATTACGAGCATAGT
TCGAAGAGGAAGGCGGGAGGAGCCGTATATGTCTACATTAACGAGGCTGGAGTCGGCTTT
AGGCACATCAAGCCACGGGTATTTTATGGCCCCAAGGAATCCCATTTCGGACAAACAGTT
GCNGCTTTGGGAGATATTGACCAAGACGGCTACGGCGACTTCGCNGTTGGAGCCCCATAC
CAAGATCAGTATGGAGTCGTCCACATTTACAGAGGTTCTGCTAATGGCATCGTTAAAAAA
TCTCAGACGATATTTGGTAAAGACTATGGCTATATTGGTGTTGCGAGTAATCAAGATCTG
ATTGGTTTCGGNGCCTCGTTATCTGGTTACGTCGACGCGGACGGCAACAAATATCCCGAT
CTTCTTATTGGCTCCTTATCAAATCACGTGACTTTGATTAGGGCGCGTCCTATTATCGAG
GTCCATATGACGTTTGAAGTGGATCGAAATGAGATTGATTTGGAGGAAAAGGATTGTGAT
GCTACCTGGTCGTGTTTTAAGATAACTTATTGCTTT
| Gene3D |
Integrin_alpha_N (IPR028994) - T[4-262] 1.6E-67 |
| ProSiteProfiles |
Int_alpha_beta-p (IPR013519) - T[14-71] 5.561 - T[78-141] 13.522 - T[142-199] 11.942 - T[210-270] 8.744 |
| SMART |
Int_alpha_beta-p (IPR013519) - T[24-76] 7.1 - T[88-148] 2.0E-12 - T[152-206] 3.1E-11 - T[219-265] 22.0 |
| PRINTS |
Integrin_alpha (IPR000413) - T[25-37] 4.5E-41 - T[85-105] 4.5E-41 - T[155-179] 4.5E-41 - T[223-244] 4.5E-41 - T[249-268] 4.5E-41 |
| Pfam |
FG-GAP (IPR013517) - T[92-132] 1.1E-12 - T[159-190] 2.4E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITA7_HUMAN | 44.322 % | 199 | 6.29E-58 |
| ITA6_HUMAN | 42.708 % | 205 | 8.28E-60 |
| ITA3_HUMAN | 41.573 % | 191 | 5.97E-55 |