- Transcript 'Boleac.CG.SB_v3.S20....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S20.g04638.01.t
Possible name(s)
IRX2; IRX4; IRX6
Gene model
Location
S20 [297,146 / 306,689]
Amino acid sequence
Length: 721
>Boleac.CG.SB_v3.S20.g04638.01.p
MMLIPPTVNLGNTETDSTSRERFYSTSGVYSXNITPNSTGGSELSSDASGDQNLYQSSVT
ESRMFLNAPKMQSDLPGFHMHAAAAVVTGHPGSFPLNSPASYAAGAATAPSHSIVPPHYG
SPTLDPTPYYSPLAPGYDMKGGDMWNGGYSQPPHTYYQYDQGFAHQYPYDRCYPMDMNDG
VRRKNATRESTNTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKE
NKMTWIPKNRANETGSGTDDRRASDDKDSDDKSDDEDCKSDKEENEENPDDKPEGEQKTE
SRPFNHQNPSLAYHQPQNSLEPIAPDVTEQCDVKPVQEYGGMMRGLSCDNRNMLCQSAPN
NALSDKLHSANLVQNPSAIKYETGSEGYNRPIWSPIESQSDKLLPSARPYQPVYGADFQC
QGTYPQDPDGHRHSTAHPHTYPTNYDMPALPHISMSNNSQESHHLHNHSASSHMRRKIFS
PMSQDIGKHIHGTGETELAQDSIRSNDYTFSSPMTNLRNYVNGAFQGSTQQVPGATMCDK
MRMSQQKSPITNADPVLSPDTGGGHYSQHHQIEQSYLQQRQGQVDHTMSRTQPAYSHSLH
RSMSGPYSSYYGDGTNCYPPQSLTEPTQLHPIPPPPYINQCKYADANAQTFMNTQARALS
HRQSYDGLNPGSNQSTTSQSPRGVPSGHQTDANAYGCVAASDDEDMRKIQSSEAISDKVS
R
Nucleotide sequence
Length: 2,691
>Boleac.CG.SB_v3.S20.g04638.01.t
AGAGATTATTTTTGATGAGAATATCTCAAAGAGCCAACATATCATTTAGAATAGGTAGAA
TTTTATGATGCTTATTCCTCCTACGGTGAATTTGGGGAATACGGAAACAGATTCAACATC
GCGAGAAAGATTCTACTCAACTTCTGGAGTTTACTCAGNCAACATAACACCGAATTCTAC
TGGTGGTTCAGAGTTGTCGTCGGACGCAAGCGGGGATCAAAATTTATATCAAAGTTCGGT
AACGGAAAGTCGAATGTTTCTGAATGCGCCCAAAATGCAATCGGATCTGCCGGGTTTTCA
TATGCACGCGGCGGCGGCAGTAGTAACGGGACACCCGGGATCATTCCCGCTCAATTCACC
AGCGAGTTACGCTGCTGGAGCAGCAACGGCACCAAGTCACAGCATCGTGCCACCGCATTA
TGGATCACCGACACTCGACCCAACGCCCTATTATTCGCCATTGGCACCTGGATATGATAT
GAAGGGCGGAGACATGTGGAACGGAGGATACAGCCAACCTCCACACACTTATTATCAATA
CGACCAAGGCTTTGCTCATCAGTACCCATACGACAGATGCTACCCCATGGATATGAATGA
TGGAGTTCGGAGAAAAAACGCCACTAGAGAATCAACTAATACTCTAAAAGCATGGCTGCA
GGAACATAAGAAAAATCCTTACCCTACCAAGGGAGAGAAAATCATGCTGGCAATCATAAC
TAAAATGACTCTTACACAGGTGTCGACTTGGTTCGCAAACGCAAGGCGGCGGTTGAAGAA
AGAAAATAAAATGACATGGATTCCGAAAAATCGCGCGAATGAAACTGGTTCAGGAACAGA
CGACAGACGAGCAAGTGATGATAAAGACTCGGATGACAAATCTGACGACGAAGACTGCAA
GTCCGACAAGGAGGAAAACGAAGAAAACCCAGATGATAAACCGGAAGGAGAGCAAAAAAC
AGAATCTCGCCCATTCAACCATCAAAATCCTTCTCTGGCATATCATCAGCCGCAGAACTC
TCTTGAGCCGATAGCACCGGACGTGACAGAACAGTGTGATGTCAAACCGGTGCAAGAATA
CGGTGGGATGATGCGTGGTTTGTCGTGTGATAATCGGAACATGTTGTGTCAAAGCGCCCC
AAACAATGCCTTGTCAGACAAACTCCATAGCGCAAATCTAGTACAAAACCCATCAGCAAT
CAAATACGAAACGGGATCAGAAGGATACAACAGACCAATATGGTCGCCCATCGAATCTCA
ATCAGATAAACTTCTGCCTTCAGCAAGGCCTTATCAACCCGTCTACGGTGCGGATTTTCA
ATGTCAAGGTACTTATCCTCAAGATCCCGATGGACATCGACATTCCACTGCACACCCCCA
CACCTACCCAACTAACTACGATATGCCAGCGTTACCTCATATATCAATGTCAAACAACTC
TCAAGAGAGTCACCATCTACATAATCATTCCGCTTCTTCACATATGCGTAGGAAGATCTT
TTCACCGATGTCGCAAGATATTGGTAAGCACATTCACGGCACGGGTGAAACCGAACTTGC
TCAAGATTCCATTAGAAGCAACGACTACACATTTAGTTCGCCTATGACAAATCTCAGAAA
TTACGTCAACGGAGCATTCCAAGGGTCAACGCAACAAGTTCCAGGAGCAACAATGTGCGA
CAAGATGAGAATGAGTCAACAAAAGTCACCTATCACCAACGCAGATCCAGTTCTATCTCC
TGATACCGGCGGCGGGCATTATTCACAGCATCATCAAATAGAGCAAAGTTATTTACAACA
GCGTCAAGGTCAAGTTGATCATACTATGTCAAGGACTCAACCCGCGTATAGTCACTCACT
TCACCGTTCTATGAGCGGGCCATATTCATCATATTATGGAGACGGAACAAACTGTTATCC
ACCCCAAAGTCTAACAGAACCAACTCAACTTCACCCAATCCCTCCTCCACCGTATATCAA
TCAATGCAAATATGCCGACGCCAACGCTCAAACATTTATGAATACACAAGCTCGTGCACT
AAGCCACCGCCAGAGCTATGATGGTTTGAACCCAGGTTCAAATCAATCGACCACTTCTCA
ATCACCACGAGGAGTTCCATCAGGACATCAGACTGATGCTAACGCTTATGGATGTGTTGC
CGCATCAGATGACGAAGACATGCGCAAAATTCAATCGAGTGAAGCAATTAGCGACAAAGT
ATCTCGATGATAAAATCCTCATCCAAATGATTCATTTACTCTCAAGGCTCGACAAGACAC
GGGAAAGTTAGCAAATTCAAGTAGCGCAAAAGCGTATTACAACATTATAGTCAAGCAAAT
AATATACGGGAACAAGTCCAAAGGCAAAATCTATCAAAATAGAGAATCCAAACAACTCGA
CGATCTGTGATTCGAACATTTCCGATGCGAAGAGTTCGATTATTTACCTTTATCTTTTCT
TTATAATACGATTATTCACTTTATTGCTGGGTTATTTTATTGATATTTCATTGTCATTCC
TATCACTTTTACTATTATTACATTTATTGTTATTAATATTATTTTTAAATTCTTATTATT
ATTGTTATTATATATCGGCAACGGTAATGCCTTACAAGACACAGTTCGGTTCGGATTTGC
TCTCGGAAACCAATTTCCTTTCAATATATTATCGCATCTGAAATACACGAC
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[177-240] 13.167 |
| SMART |
Homeobox_dom (IPR001356) - T[179-244] 1.2E-12 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[182-247] 2.35E-17 |
| CDD |
Homeobox_dom (IPR001356) - T[182-241] 3.99718E-14 |
| Pfam |
Homeobox_KN_domain (IPR008422) - T[197-236] 1.3E-14 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[215-238] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IRX6_HUMAN | 60.769 % | 159 | 2.91E-42 |
| IRX4_HUMAN | 49.474 % | 154 | 3.81E-40 |
| IRX2_HUMAN | 61.607 % | 148 | 2.99E-38 |