- Transcript 'KH2012:KH.C5.42.v3.A...' >
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- Transcript 'Boleac.CG.SB_v3.S205...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S205.g04775.01.t
Possible name(s)
CDC40; WDR25; WDR5
Gene model
Location
S205 [115,311 / 122,345]
Amino acid sequence
Length: 584
>Boleac.CG.SB_v3.S205.g04775.01.p
MAAINALKTAYGDSGGSDGSDEEPSTSEDNMIHLRQSATGTAAAGKLQLVQSAPEVITKK
DIRSVDVIDHIENKEVMFNPTYAQMFAPEQGPANPFKTEQQLAIKNTLTGHVEDAHFNAF
HFENQRRTFHSYGYAVDPSIDDTGTPGTKVVVGDIGEELIAKNNDEREKTVAEKVKKREG
DKRKRVRCDDPEDIEGFLGPWGGFVDDNKIAKPSEEEQKEINELLEKRKKRSKNFEQPSF
EEKTQLHVKDPKDYQGRSFLHIPQDTDVNLKAEDPPDKCYLPKKLIHTWSGHTRGVSAIR
LFPKSGHLLLSTSMDCKVKLWEVYNRRRLLRTYHGHGKAVRDACFSNNGTEFLTAGYDRY
IKLWDTETGECKGRFTNKKIPYCVKFNPDEDKQHLFVAGLADKKIVTWDTRSGEIVQEYD
RHLGAVNTITFVDDNKRFVSTSDDKSLRVWEWDIPVDFKYIADPGMHSMPSVTLAPNGKW
LGCQSLDNQIMIFDVHGKFRIKQKKKFKGHMIAGYACQVGFSPDMSYVCSGDGDGRVFIW
DWKTTRIYSKFRAHDRVCIGCIWLPHETSKIITCGWDGLIKLWD
Nucleotide sequence
Length: 3,007
>Boleac.CG.SB_v3.S205.g04775.01.t
TTGAGATCTGAGGTAGACTGTGAACTCAGCGCTATTTATATTGACTGGGGCTGTAGGTGC
ATTCCCGTATGGCTGCAATTAATGCGTTAAAGACGGCTTATGGAGACTCCGGTGGAAGTG
ATGGGTCTGATGAAGAGCCATCTACTTCCGAGGATAATATGATTCACCTGCGACAATCAG
CTACCGGTACGGCGGCGGCGGGGAAATTGCAGCTTGTTCAGTCAGCTCCTGAAGTAATAA
CTAAGAAAGACATAAGGAGTGTGGATGTTATTGACCATATTGAAAACAAAGAAGTTATGT
TCAACCCGACCTATGCACAGATGTTTGCACCAGAACAGGGCCCGGCAAATCCCTTCAAAA
CAGAGCAACAGCTGGCAATCAAGAACACATTGACTGGGCATGTAGAAGATGCTCATTTCA
ATGCCTTTCACTTTGAGAATCAGAGGAGAACCTTCCATAGCTATGGGTATGCTGTTGACC
CGTCTATCGATGATACTGGAACCCCTGGTACAAAGGTGGTTGTTGGTGATATTGGTGAGG
AACTCATTGCAAAGAATAATGATGAGAGAGAGAAAACAGTTGCTGAAAAGGTTAAAAAAC
GCGAGGGAGACAAGAGAAAGAGGGTTAGATGTGATGATCCTGAAGACATTGAAGGCTTTT
TAGGACCCTGGGGTGGATTTGTGGATGACAATAAAATTGCCAAGCCATCAGAGGAGGAAC
AAAAGGAAATTAATGAACTTTTGGAGAAACGGAAGAAACGCTCCAAGAATTTTGAACAAC
CATCATTTGAGGAGAAAACTCAACTTCATGTCAAAGATCCCAAAGATTACCAGGGGAGAT
CATTTTTACACATACCTCAAGACACTGACGTCAATTTGAAAGCGGAAGACCCACCAGATA
AATGCTATCTACCTAAAAAACTCATTCATACTTGGAGTGGCCACACGAGGGGAGTGTCTG
CGATTAGACTTTTTCCCAAATCAGGTCATCTACTGTTATCAACATCAATGGATTGTAAAG
TCAAGCTTTGGGAAGTTTATAATCGTAGACGTCTCCTACGTACTTACCATGGACATGGGA
AAGCCGTTCGAGATGCTTGCTTTTCAAATAATGGAACAGAATTTTTGACTGCTGGATACG
ATAGATACATCAAACTTTGGGATACAGAGACTGGTGAATGTAAAGGAAGGTTTACTAACA
AAAAAATTCCATATTGCGTCAAGTTCAATCCGGATGAAGATAAACAGCATCTGTTTGTTG
CTGGGCTTGCCGACAAAAAGATTGTAACTTGGGACACAAGGTCTGGTGAAATTGTTCAGG
AGTATGACAGGCATCTTGGTGCAGTCAATACAATTACTTTTGTTGATGACAACAAGCGAT
TTGTTTCTACGTCTGATGACAAGAGTCTGCGTGTCTGGGAGTGGGATATACCTGTTGATT
TCAAGTACATTGCGGACCCAGGGATGCATTCTATGCCGTCAGTGACATTAGCTCCAAATG
GGAAATGGCTTGGATGCCAATCACTCGATAATCAAATTATGATATTTGATGTTCATGGCA
AGTTCCGTATCAAGCAAAAGAAGAAATTCAAGGGACATATGATTGCCGGCTATGCTTGCC
AGGTTGGATTCTCTCCGGATATGTCTTATGTTTGCTCAGGCGACGGTGACGGAAGAGTAT
TTATTTGGGATTGGAAAACCACGAGGATATACAGCAAGTTTCGTGCGCACGACAGAGTTT
GTATTGGATGCATTTGGCTTCCGCACGAAACCTCAAAAATCATCACATGCGGATGGGATG
GGTTGATTAAATTGTGGGATTAGTCGATCGACGCTACTTCAACGATCGTAGTGCGTGGCT
GCTTCGAGTGACAGTGAAGCTGGCGTTGAGCGCAAACAGTTACTGTCTAGTGATAGTGGT
CCATCGCACTGCATCGATTAGTATGATGGAGTGTGGATGGCATGTCCGCCCAATGGTGGC
AATGCCAACTCTTCTTTACTGATGATATCCTCGACATGGCCACCCTTGCTGTACAAGAGG
CCTGACGAGGTTTTATCCTATCAGTGTTCCGCAATCTTAATTTGGGGAACATTAAACGTT
TTATATCGACTTCTTTTTATAATTAGAGCGCTATGCCTTTTACGAAGCATGCTGGAATTC
TCATTCCAAATTTGATCCAAGGCATGGAAGTCAAACTTGTATCAGNGCCCAACCTCAGAA
GGCTTTCTGCATGTTTCAATCCATACATCACAGCTACGATTTGGCCATACTGATTTGCTC
AGCCTTGATAAATATCAGCGGTGGACGTAAAAATTCCATCTTTCAATGACGATCAGTCCC
AATCAGAGGGGTGCAGNACGGGCAGTGCCCCCGGGCCCCAGACATTCAGGGGCACCGTAA
ATCGCTATGTTGTTAGACTAAGATATAACTGAAGTATGACGGAGGTGGGCAAACTACGGC
CAGCGGCCTTTCAATCCACATCAGACCTACATATCTTGTGGGCCCATAATTTCTCTGAGC
GGCCCTGATGGCGATTAAACGAGGCTGTTGATTACACAATATGGTAGTCGCGCGCGTGTA
CATGCGAGTCTTGTTCATTACACGCACGGTCAAACTAACCCGACTACCCTTTACATGCTG
AAAAATTTACCGATCTATCAAATTGCTGACATCTTGTAAAAGTCCGACTGGACGCTTACT
TCAACCCACGAGGCTCTCCCGGTTCATCCAGAATTTGAGCCATTCATTTCCTGGGAAATT
GTCTTCCGCTCAGTGGTCATATTCAAATGGTCCGAATCAGGTACTCGAATACTTCGTGAT
TCGATTCGGAATCTAATATCAAGTACCAATATCACTGCCATAGTCTCACTGAAAACGATC
TTATATCAAAGTGGTATATTTAGGACCTTTAGTGCAATTTGCGGCGAGATCGCGTTGTCT
CCGATACCAAATTTTACTGCCCTAGTCCAGAGATGCTGCTTTCCGACACAATTACATTTA
TTATTGC
| PANTHER |
PRPF17 (IPR032847) - T[10-584] 1.2E-265 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[264-584] 1.9E-94 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[280-584] 4.33E-70 |
| SMART |
WD40_repeat (IPR001680) - T[282-322] 3.1E-7 - T[326-365] 3.3E-9 - T[368-409] 0.17 - T[412-451] 1.8E-6 - T[457-494] 110.0 - T[500-541] 0.0047 - T[544-584] 7.9E-5 |
| Pfam |
WD40_repeat (IPR001680) - T[284-321] 1.1E-4 - T[328-365] 1.2E-6 - T[414-450] 0.005 - T[504-541] 0.0016 - T[550-584] 0.017 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[289-584] 40.102 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[289-331] 11.11 - T[333-374] 13.55 - T[419-451] 12.28 - T[519-550] 9.439 - T[551-584] 9.205 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[309-323] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR5_HUMAN | 29.276 % | 129 | 3.57E-33 |
| WDR25_HUMAN | 27.07 % | 143 | 1.28E-36 |
| PRP17_HUMAN | 63.993 % | 753 | 0 |