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- Transcript 'Boleac.CG.SB_v3.S193...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S193.g04341.01.t
Possible name(s)
GBX2; MSX1; MSX2
Gene model
Location
S193 [158,193 / 161,089]
Amino acid sequence
Length: 228
>Boleac.CG.SB_v3.S193.g04341.01.p
MKDDEMKTDDEAREMGPGPFGKNKQMKPARLSFSIESIIGSDNEQRSRQSKTNERTREIY
PAQIDTSVQYRRSQPEMVPTHPYGPYQTYSYSGHGEVRHDWFDQNRRTPASNHKLKTDSD
KAFTNLRKHKPNRKARTPFTTHQLLSLEQKFATKQYLSIAERAEFSASLDLSETQVKIWF
QNRRAKSKRLQEAKIQQAKLTASVNSDIIVSNLKRSFKGVFNPRVIGK
Nucleotide sequence
Length: 687
>Boleac.CG.SB_v3.S193.g04341.01.t
ATGAAGGATGATGAAATGAAGACTGATGATGAAGCTAGAGAAATGGGACCTGGGCCGTTT
GGAAAAAACAAACAGATGAAACCTGCCAGACTATCGTTCAGTATTGAATCAATCATAGGC
AGTGACAACGAACAGAGATCACGACAATCCAAAACAAATGAAAGGACCAGGGAAATCTAC
CCTGCGCAAATTGACACTTCAGTGCAATATCGCAGAAGCCAACCTGAAATGGTACCAACT
CATCCATATGGTCCATATCAGACATATTCCTATAGTGGCCACGGTGAAGTGAGGCACGAT
TGGTTCGATCAAAACCGTAGAACGCCCGCGTCAAACCATAAACTAAAAACGGATTCTGAC
AAAGCTTTCACAAATCTTCGNAAACACAAGCCTAACAGAAAAGCTAGAACGCCGTTCACA
ACGCATCAATTGTTGTCTCTTGAACAAAAATTCGCGACGAAACAATATCTATCTATAGCT
GAAAGAGCTGAATTTTCTGCGTCACTTGATTTATCCGAAACACAGGTAAAGATATGGTTT
CAAAACCGAAGAGCCAAGTCCAAACGCCTTCAAGAAGCAAAAATCCAACAAGCAAAACTC
ACCGCTTCCGTTAACAGTGATATTATTGTTTCAAATCTTAAACGATCATTTAAAGGTGTT
TTTAATCCTCGTGTGATTGGGAAGTAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[123-191] 1.45E-22 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[130-190] 19.888 |
| SMART |
Homeobox_dom (IPR001356) - T[132-194] 8.9E-25 |
| CDD |
Homeobox_dom (IPR001356) - T[133-191] 5.19683E-19 |
| Pfam |
Homeobox_dom (IPR001356) - T[133-189] 3.4E-21 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[154-165] 2.1E-6 - T[169-179] 2.1E-6 - T[179-188] 2.1E-6 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[165-188] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MSX1_HUMAN | 38.835 % | 129 | 1.68E-36 |
| MSX2_HUMAN | 57.5 % | 125 | 2.5E-35 |
| GBX2_HUMAN | 50.633 % | 80.9 | 6.85E-18 |