- Transcript 'KH2012:KH.C13.195.v1...' >
- Transcript 'KH2012:KH.C2.216.v2....' >
- Transcript 'Moocci.CG.ELv1_2.S25...' >
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- Transcript 'Boleac.CG.SB_v3.S188...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S188.g04158.01.t
Possible name(s)
NPLOC4
Gene model
Location
S188 [1,326 / 5,629]
Amino acid sequence
Length: 547
>Boleac.CG.SB_v3.S188.g04158.01.p
LPLFPYRLKLMYLACFRFKLCHCCFRTMSNKMIIRVQSKDGTKRLQASPSETVSSLLAKI
AKDFELTNNNNWCVYQNRDKTNELKRGSRSKLSSKNLKHGDMCYLIVTXAPQNAGDCEND
GIEXRNSSNSPINQIKEDEIDIELWKQPGQIPQSKAKSTKGVFKTDDLPTNPWDEAYLXS
KDIKFMSFHAYMRQKTAGADRGKYFKLENTKTACKLEGANGKKRSLLDLPMAITLNRQKF
RHVDNIMFENRDIADRFLDYWRKSGNQRMGYLYGRYVPHKEVPLGIRAEVCAIYEPPQES
STNSLRLLNDPYQEVADKIADALGLQKVGWIITDLVAEDRAKGNVLFVKLVSVTSQLSTV
KRFRGSESHFLTAEECIMAATLQNDHKNPCRLAKDGFYGSKFTTVVVSGDKDSCISFEGY
QVSNQGMDLVRDGCLVPTLDAPELGYIRESTPDLYVPDVFYKMKDKYGNEITKSAKPLPL
EYLLLDSVMDDLLMAVREQNNHKALEWSHNSAWMQLQQEMHHQASASPGMDMDPELREAI
ARSLRET
Nucleotide sequence
Length: 1,755
>Boleac.CG.SB_v3.S188.g04158.01.t
CTGCCACTGTTTCCATATAGGCTGAAACTGATGTATTTGGCTTGTTTTAGGTTCAAATTA
TGTCACTGCTGTTTCAGAACAATGAGTAACAAAATGATAATTCGTGTTCAATCCAAGGAT
GGAACAAAAAGACTTCAAGCCTCTCCATCAGAAACTGTTTCATCATTACTTGCGAAGATC
GCTAAAGACTTTGAACTTACTAACAATAATAATTGGTGTGTGTATCAAAATCGTGATAAA
ACAAATGAGCTAAAAAGAGGATCAAGAAGCAAATTAAGCTCAAAAAATCTCAAACATGGT
GATATGTGTTACCTCATTGTAACTGANGCACCACAAAACGCCGGCGATTGTGAAAATGAT
GGCATTGAANTAAGAAACTCCTCAAATTCGCCAATCAATCAAATCAAAGAGGATGAAATT
GATATTGAATTGTGGAAACAACCTGGTCAAATCCCACAATCAAAAGCAAAGTCAACGAAA
GGGGTTTTCAAGACAGATGATCTGCCGACAAATCCATGGGATGAAGCATATTTACNATCT
AAAGACATCAAATTCATGTCATTTCATGCTTATATGCGTCAAAAAACTGCTGGTGCNGAT
AGAGGAAAATATTTTAAATTGGAAAATACAAAGACCGCTTGTAAATTGGAGGGAGCTAAT
GGCAAGAAAAGATCTTTGCTGGATCTTCCAATGGCTATAACTTTGAACCGGCAGAAGTTC
CGACATGTTGATAATATTATGTTTGAAAACCGTGACATCGCAGATCGTTTCCTTGATTAT
TGGAGAAAATCAGGCAATCAAAGGATGGGATATTTATATGGAAGATACGTGCCACACAAA
GAGGTGCCTCTTGGGATTCGGGCTGAAGTTTGTGCAATATATGAACCTCCTCAAGAAAGC
TCAACTAATTCACTACGTTTGTTAAATGATCCATATCAAGAAGTTGCGGATAAAATAGCT
GATGCGCTCGGTTTGCAAAAGGTTGGGTGGATTATTACCGATCTTGTTGCTGAGGATAGG
GCTAAAGGTAACGTGTTATTTGTAAAATTGGTATCTGTGACATCCCAGCTAAGTACTGTG
AAACGTTTCCGTGGCAGCGAATCTCATTTTCTAACAGCAGAAGAATGCATCATGGCTGCC
ACTTTACAAAATGACCATAAAAATCCTTGCAGATTAGCCAAAGACGGATTTTATGGTTCT
AAGTTTACAACTGTTGTGGTATCAGGCGACAAAGACAGCTGTATATCATTTGAAGGATAC
CAGGTATCTAATCAAGGTATGGATCTTGTGAGGGATGGATGTCTTGTACCTACTCTTGAT
GCTCCAGAACTGGGTTATATAAGAGAAAGCACCCCAGATTTGTATGTACCTGATGTGTTT
TATAAGATGAAGGATAAGTATGGGAATGAAATTACAAAATCAGCAAAGCCTCTTCCTTTG
GAATATTTGCTGTTGGACTCTGTCATGGATGACTTGCTGATGGCGGTGCGGGAACAAAAT
AATCATAAAGCTTTGGAATGGAGTCATAACTCTGCCTGGATGCAATTACAACAAGAAATG
CACCATCAGGCTTCTGCGTCACCGGGGATGGACATGGATCCGGAACTCAGGGAAGCGATT
GCTAGAAGTCTGAGAGAAACATGAGTGATTCGGCGACTTTGAAAAAAGTTTTTGTGTGAT
GTTTTGAGACTCTGGTATTATTCTTGATATTTTGAAACCAGAAAATTAAGTAAAANAATT
ATTAATGTTTGTCGC
| Pfam |
Npl4_Ub-like_dom (IPR024682) - T[28-105] 9.3E-23 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[32-112] 2.12E-10 |
| PIRSF |
Npl4 (IPR016563) - T[32-489] 1.6E-124 - T[486-524] 230.0 |
| Pfam |
NPL4_Zn-bd_put (IPR007716) - T[135-265] 2.6E-26 |
| CDD |
NPL4_C (IPR007717) - T[234-486] 3.81362E-106 |
| ProSiteProfiles |
MPN (IPR037518) - T[246-398] 16.767 |
| Pfam |
NPL4_C (IPR007717) - T[268-486] 3.1E-75 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NPL4_HUMAN | 50.106 % | 436 | 2.08E-147 |