- Transcript 'KH2012:KH.C2.925.v2....' >
- Clone 'cima857843' >
- Region 'REG00000370' >
- Region 'REG00000002' >
- Transcript 'Boleac.CG.SB_v3.S183...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S183.g04062.01.t
Possible name(s)
HDAC1; HDAC2; HDAC3
Gene model
Location
S183 [119,136 / 124,011]
Amino acid sequence
Length: 543
>Boleac.CG.SB_v3.S183.g04062.01.p
MALTNPVNRKVCYYYDSDVGNYYYGQGHPMKPHRIRMTHNLLLNXGLYRKMEIFRPHKCT
SDEMTKYHSDDYIKFLRSIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSGGGSIAG
AVKINKQQTDIAINWGGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYALNFPLRDGMDDASYEEI
FQPVVTKVMEYYQPSAVVLQCGADSLTGDRLGCFNLTVKGHAKCLDFMKKFNVPILMLGG
GGYTIRNVARCWTYETAVALGQDIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTQEYLH
KIRQRLFENLRMLPHAPGVQMSEIPPDGVPEESDDEEHEDPDKRISMRASDKRIQRDDEY
SDSEDEGDGGRRNEEIHKKKRKLESDTPKEEVKKQETQKDSDSVKTADQPQDAMDTSAEP
EKPNEKDASVRKEEGQNLESSGKEGDQEKPAAPAAIDKSEANAESAAAKSSNDEQNEVEK
MET
Nucleotide sequence
Length: 1,926
>Boleac.CG.SB_v3.S183.g04062.01.t
TTGAAGTCTCAGTTGATCGGCGATCTCGCGCGGTTGTACTCGGTTTGGCTTTGATATCGT
CTGGAAGTTTTTTACTTGAAAGATGGCGCTTACCAATCCTGTGAACAGAAAAGTGTGCTA
TTATTACGACTCTGACGTTGGAAATTACTATTATGGCCAAGGACATCCAATGAAGCCCCA
TAGGATACGAATGACACACAACCTTCTTCTCAATTANGGACTCTACAGAAAGATGGAGAT
TTTTAGACCTCACAAATGTACAAGTGATGAAATGACCAAATATCACAGCGATGATTATAT
TAAATTTCTCCGCAGTATAAGGCCTGACAACATGTCAGAGTACACTAAACAGATGCAGCG
ATTCAATGTTGGAGAGGATTGCCCAGTATTCGATGGATTATATGAGTTCTGTCAACTTTC
TGGGGGTGGTTCCATAGCTGGGGCTGTGAAAATCAACAAGCAACAAACAGACATAGCCAT
CAACTGGGGTGGTGGACTGCATCATGCCAAAAAGTCTGAAGCATCTGGATTTTGCTACGT
TAATGACATCGTTCTTGCTATTTTGGAACTGTTGAAATACCATCAACGNGTTTTATATAT
TGATATTGACATACATCATGGTGATGGTGTCGAAGAAGCTTTTTATACTACGGATAGAGT
GATGACTGTTTCATTTCACAAGTATGGCGAGTACTTTCCAGGGACAGGCGATTTGCGGGA
CATTGGCGCAGGAAAAGGAAAGTACTATGCTTTGAATTTTCCTTTACGTGACGGTATGGA
TGATGCATCTTATGAGGAGATATTTCAACCTGTTGTTACAAAGGTGATGGAATATTATCA
ACCAAGTGCTGTGGTATTGCAGTGTGGAGCTGACTCGCTCACAGGAGATCGATTAGGCTG
TTTCAATCTCACTGTAAAAGGCCATGCCAAATGTCTCGATTTTATGAAAAAATTCAATGT
CCCGATTTTAATGCTTGGAGGAGGTGGATACACCATCAGAAACGTTGCGCGGTGTTGGAC
ATATGAAACAGCCGTTGCTCTGGGACAAGATATCCCGAATGAATTGCCTTACAATGATTA
CTTCGAATACTTTGGTCCTGACTTTAAGTTGCACATAAGTCCAAGCAACATGACAAATCA
AAACACTCAAGAATATCTTCATAAGATTCGGCAGAGGTTGTTTGAGAATTTGCGTATGCT
TCCGCATGCCCCAGGAGTGCAAATGTCTGAAATACCTCCTGATGGAGTTCCTGAAGAAAG
TGATGATGAAGAGCATGAAGATCCTGACAAGAGAATCTCAATGCGGGCATCAGACAAGCG
TATACAGCGCGATGATGAATATTCTGATTCTGAGGATGAAGGAGACGGAGGCAGGAGGAA
CGAGGAAATCCACAAAAAGAAGAGAAAATTAGAAAGTGACACTCCCAAAGAAGAAGTGAA
AAAACAAGAAACACAGAAAGATTCTGATTCTGTGAAAACAGCTGATCAACCACAAGATGC
AATGGATACCTCAGCAGAACCTGAGAAGCCCAACGAAAAGGATGCGTCAGTACGAAAAGA
AGAGGGACAGAATCTGGAATCATCTGGCAAAGAAGGGGACCAAGAGAAACCAGCCGCTCC
TGCTGCTATCGACAAATCGGAAGCAAACGCCGAGTCTGCGGCTGCGAAATCGTCGAATGA
TGAGCAAAATGAGGTGGAGAAAATGGAAACTTGATCTGCCAAGGCAATAAGCAAGGGGAA
GGGATATTTTGCTCAGTGAGCAATGTTTCTGAGACGTTCTCAGTATTATTGTCATGGACT
GTCGAAGCCCGACCGGCGGAACCGTGCGTGCTCGTCGCGTCACGAGACTGTTTGCACTGC
TCTTTTTAGGCTGATCCTGGATCATTGTATCTAAGTGCTGCTCTAGGTAAAAAGTACCGT
ACTGTA
| Gene3D |
His_deacetylse_dom_sf (IPR037138) - T[1-376] 3.0E-172 |
| PIRSF |
His_deacetylse_1 (IPR003084) - T[1-466] 4.3E-225 - T[434-542] 3700.0 |
| PANTHER |
His_deacetylse (IPR000286) - T[7-474] 5.8E-266 - T[465-534] 5.8E-266 |
| SUPERFAMILY |
Ureohydrolase_dom_sf (IPR023696) - T[9-373] 2.69E-130 |
| Pfam |
His_deacetylse_dom (IPR023801) - T[28-317] 3.4E-82 |
| PRINTS |
His_deacetylse_1 (IPR003084) - T[30-47] 1.2E-69 - T[63-81] 1.2E-69 - T[94-111] 1.2E-69 - T[115-135] 1.2E-69 - T[156-172] 1.2E-69 - T[215-228] 1.2E-69 - T[232-250] 1.2E-69 |
| PRINTS |
His_deacetylse (IPR000286) - T[137-160] 2.2E-24 - T[169-184] 2.2E-24 - T[254-264] 2.2E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HDAC1_HUMAN | 83.146 % | 768 | 0 |
| HDAC2_HUMAN | 79.958 % | 793 | 0 |
| HDAC3_HUMAN | 58.118 % | 548 | 0 |