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  1. Transcript 'Boleac.CG.SB_v3.S177...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S177.g03864.01.t

Possible name(s)

AC068533.4; CRCP; MNS1

Location

S177 [153,658 / 156,407]

Sequences

Amino acid sequence

Length: 637

>Boleac.CG.SB_v3.S177.g03864.01.p
MLASTRRTNLSHAQQEKLRVENRRKENLREDHLRLLKEDGLIKANMRSEDRVADKRFIRR
IQREEEERRMEESILKAEQNRRQRQAQLEQEERMARQLEILKLEKMRDEKMRQQVRDNSL
ELRELEAKLKAGYMNRERAAQIAEKEAIKYDGMMRDAEIAKLMKSEHERATEAERAQELE
RWQESVRYQQQLERQLEEKEKKKQEAYEEFLKEKLMIDEIVRKIYEEDQREQEIRLEKQR
ATQRYIEEFKRKREEWKRMERERLEEENRKILEFADVQQVREQDRMQKQKEREQNKSEVQ
QRLARKIRREQEEKEERERILLELYLEEQEEAEREKEKAAMERKFRQRIELQQTHAEQMQ
FKQLRKEAEEQEEDEFRRQMLAKFAEDDRIEQMNAQKRRMRQLEHKRAVEKLIDDRRKQF
EADRERELSERREEERLEAMRRQIIEEERQRLLREHATKLLGYLPKGVLADSKDLEMFDD
AFKKAYTRRQLSVQSMEVNAKEIPKMLSNFEVHGILQEYSTEMKAGKHKIGQRDQNLSTI
TYEVLKYLEGTPCINQNKECINDLCSRLNKFKLTKAEKLQIINLRPTTPVEVSLIVEESE
ERISEAEIDEMIQIIKTLPPGPGSEDNEDEEMEEGEE

Nucleotide sequence

Length: 1,914

>Boleac.CG.SB_v3.S177.g03864.01.t
ATGTTGGCTTCAACCAGGCGCACAAATCTTTCTCACGCTCAACAAGAAAAGCTAAGAGTT
GAAAACAGAAGGAAAGAGAATTTGAGGGAAGACCACTTGCGTCTATTAAAAGAAGATGGC
CTTATCAAGGCTAATATGCGTAGTGAAGATAGAGTGGCTGACAAACGTTTCATTCGTCGT
ATTCAACGCGAAGAAGAAGAGAGGCGAATGGAAGAGTCGATTCTGAAAGCTGAACAAAAT
CGTCGTCAAAGACAAGCTCAACTAGAACAAGAAGAACGAATGGCCAGACAACTAGAGATT
TTAAAATTGGAAAAAATGCGAGATGAGAAAATGCGGCAACAGGTGAGAGACAATAGCCTC
GAATTACGAGAACTAGAGGCAAAATTAAAAGCAGGATATATGAATCGTGAACGAGCAGCA
CAAATTGCTGAAAAAGAAGCTATCAAGTACGATGGAATGATGAGAGATGCAGAAATTGCT
AAATTGATGAAAAGTGAACATGAAAGAGCGACTGAAGCGGAAAGAGCACAGGAACTCGAA
CGATGGCAAGAAAGTGTTCGTTATCAACAGCAACTTGAAAGACAACTTGAAGAAAAAGAA
AAGAAAAAGCAAGAGGCGTATGAAGAATTTTTGAAAGAAAAACTAATGATTGACGAAATA
GTCAGAAAGATTTATGAGGAAGATCAACGAGAACAAGAAATTCGTCTTGAAAAGCAACGG
GCTACGCAGAGATACATTGAAGAATTCAAAAGAAAGCGTGAAGAATGGAAGAGAATGGAA
CGCGAAAGGCTTGAAGAAGAAAACAGAAAGATCCTTGAATTCGCAGATGTACAACAAGTA
CGTGAGCAAGATCGGATGCAAAAACAAAAAGAGAGAGAACAGAATAAGTCCGAAGTCCAA
CAAAGACTCGCGAGAAAAATCAGACGGGAACAAGAAGAAAAGGAAGAAAGAGAAAGAATC
CTTTTGGAATTATATTTGGAAGAACAAGAAGAAGCGGAAAGAGAAAAAGAGAAAGCTGCG
ATGGAACGAAAATTCCGCCAACGTATCGAATTACAACAAACACACGCCGAGCAAATGCAA
TTCAAACAGTTACGAAAAGAGGCTGAGGAACAAGAAGAGGATGAATTCAGACGACAGATG
CTTGCTAAATTTGCTGAAGATGATCGCATCGAACAGATGAATGCACAAAAACGCAGAATG
AGACAACTGGAACATAAGAGAGCGGTAGAAAAACTCATCGATGATCGTAGAAAGCAATTC
GAAGCCGACCGAGAACGAGAGTTGTCTGAAAGACGGGAAGAAGAAAGATTGGAAGCAATG
AGAAGACAGATTATTGAGGAGGAGCGACAACGATTGCTACGTGAACATGCTACTAAACTT
CTTGGTTACCTTCCGAAAGGTGTGTTAGCTGACAGCAAGGATTTAGAAATGTTTGATGAT
GCTTTTAAAAAGGCCTACACTCGAAGACAATTATCAGTACAAAGTATGGAAGTGAATGCA
AAAGAGATTCCTAAAATGTTGTCAAATTTTGAAGTTCATGGAATACTGCAAGAATACTCT
ACTGAGATGAAGGCTGGGAAACATAAAATAGGACAACGAGATCAAAATTTATCAACCATT
ACTTATGAAGTATTGAAATATCTTGAAGGGACGCCATGCATTAATCAAAATAAAGAATGC
ATCAATGATCTGTGTTCAAGATTAAACAAATTCAAATTGACCAAAGCGGAGAAATTACAA
ATCATAAACTTACGACCGACGACTCCTGTTGAAGTTTCTTTAATTGTGGAAGAAAGCGAA
GAGAGAATATCAGAGGCAGAAATTGATGAAATGATACAAATAATTAAAACTTTGCCACCT
GGACCGGGGTCTGAGGATAATGAAGATGAAGAGATGGAAGAAGGGGAAGAATGA

InterProScan

PANTHER
MNS1 (IPR026504) - T[9-493] 4.3E-178
Gene3D
Rpb4/RPC9_sf (IPR038324) - T[491-620] 9.8E-34
SMART
RNA_pol_II_Rpb4_core (IPR006590) - T[497-622] 1.7E-27
SUPERFAMILY
HRDC-like_sf (IPR010997) - T[505-618] 1.31E-25
Pfam
RNA_pol_II_Rpb4 (IPR005574) - T[506-618] 1.0E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MNS1_HUMAN 52.546 % 397 3.43E-132
RPC9_HUMAN 44.628 % 89 8.16E-21