Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C12.153.v1...' > 
  2. Transcript 'KH2012:KH.L147.37.v2...' > 
  3. Transcript 'KH2012:KH.S731.1.v2....' > 
  4. Region 'REG00001459' > 
  5. Transcript 'Boleac.CG.SB_v3.S175...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S175.g03812.01.t

Possible name(s)

CEP164; MED27; ROCK2

Gene model

Boleac.CG.SB_v3.S175.g03812

Location

S175 [131,444 / 135,992]

Sequences

Amino acid sequence

Length: 1,193

>Boleac.CG.SB_v3.S175.g03812.01.p
MADYGSVKQVLNTTQLAINATQQLRTTVNNVFEFLRNGIDGSEGRTQFLQTFQDLLVSVN
KDFSDLEKLGNLITNMPDLAGTPLGPAGHLCMEGDADENNFYQDTLLAYQWYAKLHARAP
IAASIMHTYKRSLHTSATALVRNRRGTMNIQTSYKPHTLNSQAVEHFMQNNLQRLFPELS
MKIIYNQGLTKILHVTVGRAFYALILFRSLMIEKVLVRGLGEDITKDVEIPDMHTPSSGI
LFASKCLIVTSQYNFNMMNDQIILEEDYDESYVPTEEEINEYARVIGLDPDSEKNLVWIA
KEGINAPLPPHWKPCQDVSGDIYYFNFETGDSIWDHPCDEYYRGIVARERAKLKTEQPKP
ESVKKKKKKKDKQKKQQSESAFKLLNPLKGMDKPGLGSGMLSPIGQSLGLGPLVRTNPSN
VEDLRPPVGTTLASTLGSTADIGRIQLEKLKTKDLDSVVEYHESEDMDSGESEDNPSSME
KMVVSSNSDETKQKKDTKEVKPMTLDSKIDILNTPTKDVIKPLLDKNEEKKPVAGKENSP
KFDYNKSFENDTKSLQDKFEVEKRQLETEHKDKVENLRKQIKEETEDEEAKLKEEQMNSL
IRLRQKLKSEAAQEESKLKSEFQCNYKKLQVDLENEKRKKLEVERLKLDKEVAEKSLELE
NEKRDKLRKLQIAHDAELEEFIKKGKEDLEMKKLQSKKELQDDSVSEERISEKRSHSAEA
HHLDRTTMMEETFSDKIHALKLDQDNQVKALQSKHSERITNIREEFDIQARKEKERLKTK
MEYEHKVELNRLEQELMKKKDIMSKKYQTQMSELQNDLDMLNTRRQHLNFQNDXISKLSE
KNDENIALLKSKAQGRTDHMDNEFIPKEPTTSRHITNDFDSKLHLQDLDQEGAEQVITSQ
LDDHHDRNKFLQSYYSKHNSQDERNSLQNARDFLQKQRTASRRSLLARDWYQERKSVSAE
TQNLLKRIQEGFIQQDISLDTRPTVSERLNLPHEQLVTGHNQFNATSPEVMQYLRTVDDK
LNVVLKLVAVHMPQNGDHRPQSSVSQDPPVKESSVPVRPSGSHQQVRNPSMPERLPHAAF
KESWHRSVNTMVEDELRNVSKYFGYDFKSSYIPEVPYRSAKDLMHDSTLDAPTKPQHETV
XAWGTLPSNSSTTSFGSSPAPISNRTSDTVTSPRSVKLVLDANTNELRAVPEV

Nucleotide sequence

Length: 3,582

>Boleac.CG.SB_v3.S175.g03812.01.t
ATGGCAGACTATGGTAGTGTTAAACAGGTCTTGAATACAACACAACTTGCAATCAACGCA
ACGCAGCAGCTGCGGACAACAGTAAATAATGTGTTTGAATTTCTGAGAAATGGCATTGAT
GGAAGTGAAGGAAGAACTCAATTTCTGCAAACTTTTCAGGACCTCTTGGTTTCTGTGAAT
AAAGACTTCAGTGACCTGGAGAAGTTAGGCAATTTAATTACGAATATGCCAGATCTAGCA
GGCACTCCTCTCGGACCAGCAGGGCATTTATGCATGGAGGGTGACGCAGATGAAAATAAT
TTTTACCAAGATACNCTACTAGCTTACCAATGGTATGCGAAACTACATGCCCGTGCCCCG
ATTGCAGCCAGCATTATGCATACCTACAAGCGTTCCTTACATACATCTGCCACAGCACTC
GTGAGGAATCGGCGTGGTACAATGAATATACAAACTAGCTATAAGCCTCATACTTTGAAT
TCGCAAGCTGTAGAGCACTTTATGCAAAATAACTTACAGAGATTGTTCCCGGAACTATCC
ATGAAAATTATTTACAACCAAGGGCTGACCAAGATTCTTCATGTTACGGTCGGGAGGGCA
TTTTATGCCTTGATATTATTTAGAAGCTTAATGATTGAAAAGGTTCTTGTACGAGGACTA
GGAGAGGATATCACCAAAGATGTGGAAATTCCAGACATGCATACCCCATCTAGTGGTATC
TTATTTGCTAGCAAGTGCCTTATTGTGACCTCACAATATAATTTCAATATGATGAATGAT
CAGATTATTTTGGAAGAGGATTATGATGAAAGTTATGTCCCTACAGAAGAAGAAATAAAC
GAGTATGCCAGAGTGATTGGCCTGGATCCTGACAGTGAAAAAAACCTTGTATGGATTGCT
AAGGAAGGTATAAATGCTCCCCTGCCACCTCACTGGAAGCCTTGTCAAGATGTCAGTGGA
GATATATACTATTTCAACTTTGAAACCGGAGATAGTATTTGGGATCATCCATGTGACGAG
TACTACCGAGGTATAGTTGCCAGAGAGAGAGCAAAGTTGAAAACAGAGCAACCCAAGCCG
GAATCAGTAAAAAAGAAAAAGAAGAAAAAAGACAAACAAAAGAAACAACAATCAGAGAGC
GCATTCAAGTTGTTGAATCCATTGAAAGGTATGGATAAGCCAGGCCTCGGAAGTGGGATG
CTCTCTCCCATCGGTCAAAGCCTTGGGTTAGGTCCATTAGTAAGAACTAATCCAAGCAAT
GTGGAAGATCTTCGACCCCCTGTTGGCACAACGTTAGCCAGTACATTAGGAAGCACGGCA
GACATTGGTCGAATACAACTCGAGAAACTCAAGACCAAAGATCTTGACTCGGTTGTTGAA
TATCATGAATCAGAAGACATGGATTCTGGAGAAAGCGAAGATAACCCATCCAGTATGGAG
AAGATGGTGGTGTCATCAAATTCTGATGAAACAAAGCAAAAAAAGGACACAAAAGAAGTG
AAGCCCATGACACTAGATAGCAAGATCGACATACTCAATACGCCTACCAAAGATGTCATC
AAGCCTCTACTCGATAAAAATGAAGAGAAGAAGCCTGTGGCTGGTAAAGAGAACAGTCCA
AAATTCGACTACAATAAAAGCTTTGAAAATGATACCAAATCTCTTCAGGACAAATTTGAG
GTTGAAAAACGACAACTTGAAACAGAACACAAAGATAAGGTGGAAAATCTGCGGAAACAG
ATTAAGGAAGAAACTGAAGATGAAGAAGCAAAATTGAAGGAAGAACAAATGAACTCTCTG
ATTAGATTGAGACAGAAATTGAAAAGTGAAGCAGCACAAGAGGAATCCAAATTGAAATCC
GAGTTTCAATGCAACTACAAGAAATTGCAAGTGGATCTGGAAAACGAGAAACGCAAAAAA
CTGGAAGTGGAAAGGCTGAAATTAGATAAAGAAGTTGCGGAAAAGAGTCTAGAACTGGAA
AATGAGAAGAGAGACAAACTCAGAAAGTTGCAAATAGCTCATGATGCGGAACTGGAGGAA
TTCATAAAGAAGGGGAAGGAGGATCTAGAAATGAAAAAACTTCAGTCGAAAAAAGAACTG
CAAGACGACAGTGTGAGTGAGGAACGGATTTCAGAAAAAAGAAGTCACAGTGCAGAAGCA
CATCATCTTGATAGGACTACTATGATGGAGGAAACGTTCTCTGATAAAATACATGCATTG
AAGCTTGACCAAGACAATCAGGTAAAAGCACTTCAATCAAAACACAGCGAAAGAATAACT
AACATAAGAGAGGAGTTTGATATTCAAGCAAGGAAGGAAAAGGAACGCTTGAAAACCAAA
ATGGAATACGAACACAAGGTTGAACTCAATCGCTTGGAACAAGAGTTGATGAAGAAAAAG
GATATTATGAGCAAGAAATACCAGACTCAAATGTCTGAATTGCAAAATGACCTGGACATG
CTGAATACTAGGCGTCAACATCTCAACTTTCAGAATGACNAAATTTCCAAGCTAAGTGAA
AAAAATGATGAGAACATCGCATTATTGAAATCAAAAGCACAGGGCCGTACTGATCACATG
GATAATGAATTCATTCCCAAAGAACCAACAACATCAAGGCATATTACTAATGATTTTGAT
TCCAAACTCCACTTGCAAGATTTGGATCAAGAAGGTGCCGAACAGGTTATTACCAGCCAA
CTTGATGATCATCATGACAGAAATAAGTTTCTACAGAGTTATTACAGTAAACACAATTCT
CAAGATGAACGAAATAGTCTACAGAACGCTCGTGATTTTCTTCAAAAACAAAGAACAGCC
TCACGTCGATCTTTACTTGCTAGGGATTGGTATCAAGAGCGTAAGTCTGTATCTGCAGAG
ACGCAAAATTTGCTGAAAAGAATTCAAGAAGGTTTTATTCAGCAAGATATTTCTCTGGAT
ACTAGACCCACTGTGTCTGAACGGCTCAATTTACCACATGAACAGCTGGTCACTGGCCAC
AATCAGTTCAATGCTACATCGCCTGAAGTAATGCAGTACTTGAGGACTGTGGATGATAAA
TTAAACGTGGTCTTGAAGCTGGTAGCTGTACACATGCCTCAGAATGGAGACCACAGGCCA
CAATCATCTGTTTCACAAGACCCGCCGGTTAAGGAATCATCTGTTCCGGTACGTCCTTCA
GGATCTCATCAACAGGTTAGGAATCCTTCAATGCCTGAACGGTTACCGCATGCTGCATTC
AAAGAATCTTGGCATCGGTCTGTAAACACGATGGTGGAAGATGAATTGAGAAATGTTTCC
AAATACTTTGGCTATGACTTCAAATCTTCCTACATTCCAGAAGTGCCTTACAGAAGTGCT
AAAGATCTGATGCATGATTCCACTTTAGATGCTCCAACAAAGCCTCAACATGAGACAGTC
NCTGCTTGGGGCACTCTACCTTCTAACAGCTCCACAACCAGTTTTGGCAGCAGCCCTGCT
CCCATTTCAAATAGAACAAGTGACACGGTAACATCCCCGAGAAGTGTTAAACTGGTTCTA
GATGCAAACACAAATGAACTAAGAGCAGTCCCTGAGGTTTAA

InterProScan

SUPERFAMILY
WW_dom_sf (IPR036020) - T[296-339] 1.23E-9
ProSiteProfiles
WW_dom (IPR001202) - T[306-339] 12.905
SMART
WW_dom (IPR001202) - T[307-339] 4.8E-6
Pfam
WW_dom (IPR001202) - T[308-337] 3.9E-7
CDD
WW_dom (IPR001202) - T[309-339] 1.15286E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CE164_HUMAN 65.306 % 167 1.25E-41
MED27_HUMAN 31.197 % 101 4.67E-23