- Region 'REG00000005' >
- Transcript 'KH2012:KH.C1.26.v6.A...' >
- Region 'REG00001502' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Boleac.CG.SB_v3.S174...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S174.g03780.01.t
Possible name(s)
SNX2; SNX30; SNX7
Gene model
Location
S174 [80,268 / 86,241]
Amino acid sequence
Length: 496
>Boleac.CG.SB_v3.S174.g03780.01.p
MADFIDPLTRSAEAGSESDDDDVLQTGNPTDEGNTEGDIFDEEGEVETTKDKEDADDLDN
VIDLVKDGSLTLLKKKEKKFSSLPSFNEEQDLFITVENPEKVILAMETYVSYEIATKTTR
SCFDNPEYKVRRRYQDFIWLRSKLEEDYPNHLIPPLPSKFIVKGMVDRFSQDFVGTRSRA
LDSFTKKIAEHPVISFSEHLKVFLTSEDFADHKKQSKPGILSRVGGTVKSAASVTSSMRS
KPRDSEFAEMSDHVAAFREQVAVADRVAERLLGEEKGLVEDLKEYAPVYLNWASNENQVL
GPIMTSLSKCVDTCREAAEKNAKSHETEFIPPLKEYVLYCDGIEQVFKRRDVIQSQKERC
LDDLNKKKEEKGNLPATDQSYSIGAMLGQKPEDIKQQKELKLSQQVDELTTRYEESSDLL
ERANADLRSDMERWKRNKRQDMKNILTQLADSHISYQSQCLSAWESLIPLMQGKIDFGDL
GNISESNEESAKEIVE
Nucleotide sequence
Length: 2,250
>Boleac.CG.SB_v3.S174.g03780.01.t
GAATCGACGAGGAAACGAAACTGCAATCTGCATCAGGCGGCTTATTCTCGGTTCGTTTGC
TGGATTACAAGGAGAAAATGGCCGACTTTATTGATCCATTAACGCGATCGGCTGAAGCAG
GGTCAGAATCCGACGACGATGACGTGTTACAGACGGGAAACCCAACCGATGAAGGGAACA
CAGAGGGAGATATTTTTGACGAAGAGGGAGAGGTCGAAACTACGAAAGATAAGGAGGATG
CTGATGATCTTGATAATGTGATTGATCTCGTAAAAGACGGCTCGTTGACGCTTCTCAAGA
AAAAAGAAAAGAAATTTTCGTCGTTGCCAAGTTTTAATGAAGAACAAGATCTTTTCATCA
CGGTCGAAAACCCTGAGAAAGTTATTCTAGCAATGGAGACATACGTCTCATATGAAATTG
CCACTAAGACGACCAGAAGCTGCTTCGACAATCCTGAATACAAAGTACGACGACGATACC
AAGACTTTATATGGCTCCGTTCAAAACTTGAGGAAGACTATCCAAACCATTTGATACCTC
CGTTACCATCAAAATTCATCGTCAAAGGAATGGTGGATAGATTCAGTCAAGATTTTGTTG
GAACACGGAGCAGAGCGCTTGATTCCTTCACTAAGAAGATCGCAGAGCATCCTGTAATCT
CATTCAGCGAGCATTTGAAAGTCTTCCTAACCTCTGAGGACTTTGCCGACCACAAGAAAC
AAAGCAAGCCGGGCATTCTGTCTCGAGTCGGCGGCACAGTCAAGTCTGCGGCTTCTGTGA
CATCATCGATGAGATCCAAACCTCGGGATTCTGAGTTCGCTGAAATGTCCGACCACGTGG
CTGCTTTCCGGGAACAAGTCGCCGTCGCTGATCGAGTCGCAGAAAGACTTCTGGGGGAGG
AAAAAGGATTAGTAGAAGATTTGAAGGAATACGCGCCGGTTTATTTAAATTGGGCATCCA
ACGAGAATCAAGTTTTAGGTCCTATTATGACGTCACTATCCAAATGCGTTGACACTTGTC
GTGAAGCTGCGGAGAAGAACGCGAAAAGTCATGAAACGGAATTTATACCGCCATTGAAAG
AATATGTTCTCTACTGTGATGGAATAGAGCAAGTCTTCAAGCGTCGTGATGTCATACAGA
GCCAAAAGGAGAGATGTCTAGACGATTTAAATAAGAAAAAAGAAGAGAAAGGCAATTTGC
CGGCCACAGATCAATCATACTCGATAGGAGCGATGCTCGGCCAGAAGCCGGAAGACATCA
AGCAACAGAAGGAATTGAAACTGAGCCAGCAAGTCGATGAGTTGACGACACGGTACGAGG
AGTCGAGTGATCTCCTCGAGCGAGCGAACGCGGATCTTCGGTCCGATATGGAGCGATGGA
AACGAAACAAAAGACAAGATATGAAAAATATTTTGACACAACTTGCAGATAGTCACATCT
CCTACCAGTCGCAGTGCCTGTCTGCGTGGGAGTCACTAATTCCGTTAATGCAAGGAAAAA
TAGATTTTGGAGATCTTGGCAATATTTCTGAATCCAACGAAGAATCAGCAAAAGAAATTG
TGGAATAGAACTAAATTTTGGTCCCAAAATTTATGCTTTAACACAGAAATGTTGCATTTT
CTTCACATAGTCCACTTTAATTCCATAGGCCTACTATTATATATACATCTCAAAGTTGAA
ATTAACTCGCTCATATTTTGGAATATTGTACTCCAATCAAGTTCTGCCTGCTTGAACCAT
CACACTTCCTGTGAATGGATGCACCCACTCCTTCGCAAATTGGAGTAATGTAGTTCACTC
CAGTCGAGTTCTACTCTGCTATTGGCCTTTAGGGTCGGTTGCGTAGATACAAACTAAGTA
GCACGCAAATCCCCCCATATCTCTGGATGTATCCATTCGCTCTAAAATTGGAATGATGTA
CTCCAATCCAATCGAGTTCTGATCGGCTGTGATCAGCGCATGTGCGCAAAGCGATAGTTG
AAATATTTGACAATCACGTATGACATTGAAATTCAAGCGTCAGCCAATCAGCGAGCATCT
GTCTGCGATTCACCCTGACTTTAATGCCAACCTTACTAATTATATTCGATTGTGTCTTTA
TCATAGACTCTATATTAAATTTGCCTCATATATCGTATATTACATCATTGTTTACGTTTG
CCGACTGGTAGTGGTGTATTTGTTGCCTGAAATGTGCAATTGTGGCGAAATACGTTAATT
TTCGCATTAAATATCTTCGTTCTTGAAATA
| Gene3D |
PX_dom_sf (IPR036871) - T[86-218] 1.6E-36 |
| SMART |
Phox (IPR001683) - T[88-207] 5.6E-17 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[89-208] 7.59E-29 |
| ProSiteProfiles |
Phox (IPR001683) - T[90-211] 18.022 |
| Pfam |
Phox (IPR001683) - T[95-206] 9.8E-22 |
| Pfam |
Vps5_C (IPR015404) - T[237-468] 5.3E-17 |
| Gene3D |
AH/BAR_dom_sf (IPR027267) - T[239-473] 6.9E-44 |
| SUPERFAMILY |
AH/BAR_dom_sf (IPR027267) - T[270-367] 4.71E-12 - T[409-474] 4.71E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX2_HUMAN | 24.937 % | 118 | 1.14E-28 |
| SNX30_HUMAN | 42.784 % | 330 | 4.59E-109 |
| SNX7_HUMAN | 38.058 % | 289 | 1.46E-93 |