- Transcript 'Boleac.CG.SB_v3.S159...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S159.g03295.01.t
Possible name(s)
EXOSC4; EXOSC6; SOD2
Gene model
Location
S159 [21,644 / 33,377]
Amino acid sequence
Length: 430
>Boleac.CG.SB_v3.S159.g03295.01.p
MPSDSRRIPAPEGSLSLDEFIQRSCIDSFDGKTRADGRSCDESRPIFLKSGIIPQAQGSA
YIEMGKTKVICAVYGPRDFGRKDSYQMKGDLAAAIKKDFGSFEKMKEKFSATSIAIQGSG
WGWLGYNTARNQLEIATCANQDPLQATTGLIPLLGIDSTGRMWLKDMMKRLSSDDYELKG
QSTRNIQRWYGKTRADGRSCDDSRPIFLKSGIIPQAQGSAYIEMGKTKVICAVYGPRDFG
RKDSYQMKGALKCEFKFAPFSCHKRRGHVPDDEEMEYSQVMMQSLEPAVMMDKFPKSQVD
VYAYVLENDGGSLAAAITASSLALTDASIEMYDMAAACNIRLXGKDTIVHDPTAIEEYDR
TKVSDDXCDNHGNMTIALLPXLNQVSGMLSIGVIDCDVLSEATKICHASAQEVYAVLQKA
VFKSYGELSK
Nucleotide sequence
Length: 1,639
>Boleac.CG.SB_v3.S159.g03295.01.t
GTTTGCTTTTTCATTTGTTAACAGTGTGTATTATATTTAATAAGACTTGATCAATCACCA
TAGTAGGTCCATTTTAATCCATCATGCCGTCTGATTCAAGAAGAATTCCTGCACCNGAAG
GCAGCTTGAGCCTTGATGAATTCATTCAAAGAAGTTGTATTGATTCTTTTGATGGGAAAA
CACGAGCAGATGGTCGTTCCTGCGATGAAAGCCGTCCAATTTTTCTCAAGTCGGGCATTA
TCCCACAAGCACAAGGATCAGCNTACATAGAAATGGGTAAAACAAAAGTTATTTGTGCTG
TGTATGGACCTAGAGACTTCGGAAGAAAAGATAGCTACCAAATGAAAGGCGATCTTGCAG
CCGCTATCAAGAAAGATTTTGGATCGTTTGAAAAAATGAAGGAAAAATTCTCCGCCACTT
CGATCGCGATACAAGGCTCGGGTTGGGGTTGGCTTGGATATAACACAGCAAGAAATCAAC
TGGAGATCGCAACGTGTGCTAATCAAGATCCTCTACAAGCTACAACAGGACTTATCCCAC
TATTGGGTATCGATTCAACTGGGAGAATGTGGCTGAAAGATATGATGAAGCGTCTAAGTA
GTGATGATTATGAATTGAAGGGACAGAGCACTCGAAATATACAACGATGGTATGGGAAAA
CACGAGCAGATGGTCGTTCCTGCGATGACAGCCGACCAATTTTTCTCAAGTCGGGCATTA
TTCCACAAGCACAAGGATCAGCGTACATAGAAATGGGTAAAACAAAAGTCATTTGTGCTG
TGTATGGACCTAGAGACTTCGGAAGAAAAGATAGCTACCAAATGAAAGGTGCATTGAAAT
GTGAATTCAAATTTGCCCCATTCTCATGTCACAAAAGAAGAGGCCATGTGCCGGATGATG
AGGAAATGGAATATTCACAGGTAATGATGCAGTCACTTGAACCTGCTGTGATGATGGATA
AATTCCCCAAATCACAAGTTGATGTGTACGCTTACGTATTGGAAAATGATGGCGGATCTT
TAGCAGCTGCTATCACTGCGTCTTCCCTAGCTCTTACCGATGCATCTATCGAAATGTACG
ACATGGCAGCTGCTTGCAATATACGTCTNNATGGAAAGGATACGATAGTCCATGATCCTA
CCGCGATAGAGGAATACGATCGAACAAAAGTTAGCGATGACNTTTGTGATAATCATGGCA
ACATGACGATCGCTCTTCTGCCGCANTTAAATCAAGTGTCCGGAATGCTCTCTATAGGTG
TGATTGACTGCGATGTTTTGTCTGAAGCGACAAAAATATGCCACGCATCTGCACAAGAAG
TTTATGCTGTCTTACAGAAAGCCGTTTTCAAATCTTATGGAGAGTTATCTAAATGACCAA
GGCTGGATTTTTCAAGTCTGCCAAAGATGAAAAAAGGCTGTGGCTGTGCAGTTGCTTTAT
GATGCAAGCCATTGTTTCAATGGATATTAGTGACAGTGTTTATCAACGATGGAACAGAAC
ATAGCTGATGGGATAATACTGCGACAATTTCAGCCTACGTTGGCTGCAGCGTGACATTAC
ATTTGTCAGGAACGGTCATTTGAAATTGGAAACCATGAACTATTACATCAAAGGGGGCCT
GCGGTTAAAATATGATGGT
| Gene3D |
PNPase/RNase_PH_dom_sf (IPR027408) - T[12-76] 5.1E-7 - T[190-428] 6.8E-66 |
| SUPERFAMILY |
Ribosomal_S5_D2-typ_fold (IPR020568) - T[29-82] 1.01E-15 - T[191-357] 4.56E-41 |
| Pfam |
ExoRNase_PH_dom1 (IPR001247) - T[42-82] 8.7E-12 - T[203-330] 7.0E-37 |
| Gene3D |
SOD_C_sf (IPR036314) - T[82-176] 2.9E-23 |
| SUPERFAMILY |
SOD_C_sf (IPR036314) - T[84-166] 4.32E-23 |
| Pfam |
Mn/Fe_SOD_C (IPR019832) - T[88-158] 1.2E-16 |
| SUPERFAMILY |
ExoRNase_PH_dom2_sf (IPR036345) - T[331-427] 6.78E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EXOS4_HUMAN | 31.25 % | 112 | 1.62E-28 |
| EXOS6_HUMAN | 35.897 % | 124 | 9.59E-33 |
| SODM_HUMAN | 70 % | 113 | 3.35E-29 |
