- Transcript 'Boleac.CG.SB_v3.S148...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S148.g02911.01.t
Possible name(s)
CDC23; CDC27; TTC6
Gene model
Location
S148 [10,866 / 20,454]
Amino acid sequence
Length: 910
>Boleac.CG.SB_v3.S148.g02911.01.p
MILQEPVKSSILHCLNHYAYADAMFLAERLFAEVGSNDALHLLATTYYQSGKPKVAAVLL
DNHNISTPQCRLLHAQCYWDLKIYSKVEQILTCGPSNKGTYLFKPKCNVATVINEIQREF
GESACYVLSLLGKTYLKTERCQLAEQCLLAALKLNPLLWVSFRKLCEAGHNPDPQKIFAS
HSALNMSISKLHSNNDRPATQPAAPSIQYRSLNVRESEPESNILRTRQLHNRPNLSQVPP
SNVLSNKQAQINVEKTQPSPCMVNPIVLQLNCDNMLTPPNIKQDTLGDSLNPLPSSACSQ
KDTSSTTPGHQVYRSTPSDDQFAEWNSTIAYSNSGVQPSRQKPTMTQRKINRVLNTPSTL
SPISPRFGMAPLADTPSPVGERVGSMVTPVEVIQQPDVTAPVKKMVTRQSRKLNSGHHGT
NPAFGKLHFSSENTSRCLTTGIANNTKGLAKSSSNPAVPARRSTRNFPNAGSAIKENNRN
AVTKGKHAQSTKRNVKSRSNQSKIEDASICTDTYPADGQLNTHNWDVFDGILKVMRLVGE
SYLALCQYNCREALSHLSNVSFNHRKSGWVLSIIAKAHFELNEYVEAVTVFKELRSIAPH
DTFGLEIYSTALWHLHRDVELSNLAHDLQELDRLCPETWCAVGNCFSLQRDHASAASFFR
RAIQLDPEFSYAYALLGHEKALVEDFEGALTCYRNALRWNSRLYNAWYGIGTIYYKQEKY
KNAELHFRKSLEINPHNSVLLCHIGIVQHALQLTSAACDTLHAAVEMSPRNPLCKFHHAN
VLIAMERYEDAANELRELKEIVPKESLVYFLLGKVYKKLKQNHLAVICFSWAMDLDPKGA
NNQIKEAINRQHLMNDDNDIDVETSGFDTDISHLVSSDIMGGDHVLTHEGFLSRSSRIDE
TNGDSDSDSL
Nucleotide sequence
Length: 2,925
>Boleac.CG.SB_v3.S148.g02911.01.t
GATATCATAGGCCTACTACCGTACCGGTACGTACATCAGATAATAAAAAGATCTTGCCAA
CTTTGTAGTTCCATGTGTGATGCCCTGCCCTTGTTAAGATCAACGAGACAAGCATACCAT
GATCCTGCAGGAGCCAGTCAAGTCCTCAATATTGCATTGCCTGAATCACTATGCATATGC
CGATGCAATGTTTCTGGCAGAGCGTCTTTTTGCTGAAGTTGGCTCCAATGATGCCCTCCA
CCTATTGGCTACAACGTACTATCAATCTGGAAAGCCGAAAGTTGCTGCTGTTTTGTTGGA
TAATCATAATATTTCGACACCGCAGTGTAGACTTTTACATGCACAATGCTACTGGGATCT
CAAAATTTATTCCAAAGTGGAGCAAATTTTAACATGTGGGCCTTCTAACAAAGGAACATA
CTTGTTCAAGCCAAAATGCAATGTCGCCACTGTGATAAATGAAATTCAAAGGGAGTTTGG
GGAATCAGCTTGTTATGTGCTAAGTTTGCTTGGTAAAACATACCTGAAAACAGAAAGATG
CCAACTCGCTGAGCAATGCCTTCTTGCTGCTTTAAAATTGAACCCTCTTCTTTGGGTATC
GTTCAGAAAATTGTGTGAAGCGGGTCATAATCCAGATCCTCAGAAGATTTTTGCATCTCA
TAGTGCATTGAACATGAGCATATCGAAATTACATTCCAACAATGATAGACCAGCTACTCA
GCCTGCTGCTCCATCTATACAATATCGAAGTCTTAACGTAAGAGAGTCAGAACCAGAGTC
AAATATCCTGCGAACTCGTCAGCTACATAATCGCCCAAATCTATCACAGGTGCCCCCATC
CAATGTTTTATCGAATAAGCAAGCTCAAATCAATGTAGAGAAAACCCAACCGTCACCATG
CATGGTCAATCCAATTGTTCTCCAGTTAAATTGTGACAACATGCTTACACCTCCTAATAT
TAAACAGGACACACTTGGTGACAGTTTGAACCCGCTGCCATCTTCTGCATGCTCACAAAA
AGACACCTCCAGTACTACACCTGGGCATCAGGTTTATCGGTCCACTCCATCAGATGATCA
GTTTGCAGAATGGAATAGTACAATTGCATATTCAAACTCAGGAGTCCAACCTTCAAGACA
GAAACCGACCATGACCCAACGGAAAATCAATAGAGTTCTCAATACTCCTTCCACTTTGAG
CCCAATCTCTCCAAGGTTTGGTATGGCTCCGCTTGCAGACACACCCAGTCCAGTTGGAGA
ACGTGTAGGGTCAATGGTGACGCCTGTGGAGGTTATCCAACAACCAGACGTCACAGCACC
AGTGAAAAAGATGGTCACGAGGCAATCTAGAAAACTAAATTCTGGGCATCATGGGACAAA
TCCAGCTTTTGGAAAATTGCATTTTTCCTCCGAAAATACAAGTCGGTGTTTAACTACAGG
AATAGCAAATAATACGAAAGGTCTTGCCAAGTCTTCATCTAATCCTGCAGTACCAGCTCG
GAGGAGCACCAGAAACTTTCCTAATGCTGGAAGTGCCATAAAGGAGAACAACAGAAATGC
AGTCACTAAAGGGAAACATGCTCAGTCAACAAAGCGCAATGTAAAATCACGCAGTAATCA
GAGTAAAATTGAAGATGCTTCAATCTGCACTGACACATATCCTGCGGATGGTCAATTGAA
CACACATAATTGGGATGTATTCGATGGCATCCTGAAAGTTATGAGATTGGTCGGCGAAAG
TTATCTTGCACTGTGTCAATACAATTGTCGCGAGGCACTTTCACATTTGAGCAACGTATC
GTTTAATCACAGAAAAAGTGGATGGGTGTTGTCGATAATTGCAAAAGCACATTTTGAATT
GAATGAATATGTTGAGGCTGTCACCGTCTTCAAAGAATTACGTTCCATCGCACCACATGA
CACTTTCGGATTAGAAATCTACAGCACTGCATTGTGGCATTTGCATAGAGATGTGGAACT
GTCCAACTTAGCCCATGATTTACAGGAATTGGACCGTTTATGTCCTGAAACATGGTGTGC
TGTTGGCAACTGTTTCTCCCTTCAACGAGACCATGCATCTGCGGCAAGCTTTTTCCGGCG
AGCTATTCAGTTGGATCCAGAGTTTTCTTATGCTTATGCATTGTTAGGACATGAAAAAGC
TTTAGTCGAAGACTTTGAAGGAGCTTTGACATGTTATCGTAACGCTTTGAGGTGGAACTC
TAGGTTATACAATGCATGGTATGGAATAGGAACAATATACTATAAGCAAGAGAAGTACAA
GAATGCCGAGCTTCACTTCAGGAAGAGCCTTGAGATTAATCCACACAATTCCGTTTTGTT
GTGCCACATTGGCATAGTTCAACATGCACTTCAACTCACATCTGCTGCTTGCGACACATT
ACACGCTGCAGTGGAAATGAGTCCGAGAAATCCTCTATGCAAGTTCCATCATGCAAACGT
ACTCATCGCTATGGAGAGATATGAAGACGCCGCAAATGAACTTAGAGAATTGAAAGAAAT
TGTACCAAAAGAAAGTCTAGTCTATTTTCTACTGGGAAAGGTATATAAAAAACTGAAGCA
AAATCATCTTGCAGTAATATGCTTCTCTTGGGCGATGGATCTCGATCCGAAAGGTGCCAA
CAATCAAATCAAAGAGGCAATAAATAGACAACATCTCATGAATGACGACAATGATATAGA
TGTTGAAACCTCAGGATTTGACACAGACATATCACATCTTGTTTCATCCGATATAATGGG
CGGAGATCACGTCCTGACACATGAAGGATTTCTCAGCCGTTCCAGCAGAATCGATGAAAC
GAATGGCGACAGCGATAGTGACAGTTTATAACACTAAATGAGGATTAGCATAGTCAAATT
TTCCAGTAAAGTATCATATATTTCACGTTCCCAAGCACGGGATTG
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[1-180] 6.2E-39 - T[527-600] 5.8E-17 - T[602-733] 8.7E-44 - T[734-837] 5.7E-30 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[38-101] 3.94E-17 - T[129-166] 3.94E-17 - T[524-597] 3.94E-17 - T[636-839] 3.79E-38 |
| SMART |
TPR_repeat (IPR019734) - T[125-158] 0.54 - T[568-601] 11.0 - T[636-669] 1.7E-4 - T[670-703] 14.0 - T[704-737] 2.9E-8 - T[738-771] 70.0 - T[806-839] 0.043 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[125-158] 6.756 - T[568-601] 7.375 - T[636-669] 10.65 - T[670-703] 7.139 - T[704-737] 13.128 - T[738-771] 5.812 - T[772-805] 5.369 - T[806-839] 9.44 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[568-601] 7.307 - T[636-839] 37.859 |
| Pfam |
TPR_repeat (IPR019734) - T[637-668] 0.065 - T[808-838] 0.019 |
| Pfam |
TPR_1 (IPR001440) - T[705-737] 1.1E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC23_HUMAN | 33.333 % | 119 | 7.36E-28 |
| CDC27_HUMAN | 40.315 % | 595 | 0 |
